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berkeley_reactor_200306_biofilm_scaffold_147575_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(4503..5951)

Top 3 Functional Annotations

Value Algorithm Source
GH21940 n=1 Tax=Drosophila grimshawi RepID=B4J8I1_DROGR similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 493.0
  • Bit_score: 229
  • Evalue 6.20e-57
Uncharacterized protein {ECO:0000313|EnsemblPlants:ONIVA07G10380.1}; TaxID=4536 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza nivara (Indian wild rice).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 472.0
  • Bit_score: 220
  • Evalue 4.00e-54
PE_PGRS50; pe_pgrs50 protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 489.0
  • Bit_score: 199
  • Evalue 1.90e-48

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Taxonomy

Oryza nivara → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1449
TTCGGCGGCCTCGGTTGGGGCGGTCTTGGCTGGGGCGGCTGGGGTTGGGGTGGCGGCTGGGGTGGTTGGGGAGGTTGGGGCGGTGGCTGGGGAGGTTGGGGTGGTGGCTGGGGCGGCTGGGGTTTCCACCGCCACTATCCGTTCTTTCCCGGTGGGGGTCGTCGCTGGGCCGGGAATTGGAACAACGGGGGCTGGAACAACGGCTGGAATCACGGCGGAAACTGGAACCGCGGCGGCGGTTGGAACAACGGGGGTTGGAGCAACTGGGGCGGTCCTCGCGGCGGTTGGAACAGCGGAACGGGGTTCAACCGCGGCGGCGGCTGGAACAACCGGTTGACCAACATGGGGGGCGTGGGAGGCCACGGGGCCCTTGCGGCGAACGCGCTCGGCCGGTCGCCGATGGCCCGGCATGGCGGGGCGTTCGCGCCCCCCTCGTCACGCCCGTATGCGAACCCGTTCATGCACCAGGCGTCGTCGGCCGTCGGGGGGCAGGGGGTTGCCCGCCACGCCGTCTCACGCGGCCCCGTCGGGGCGAACTGGACGGCGGGCTATAACGGCGTCCACAACGCGGCGTTCCAACGCAACGCGGCCCGGTCTTCGTTTACAGGCGCGGGCTTCGGCCACTCGGCGCTCCCGCAAAACGCGGCCCGGTCTCCTCTAACGGGCGCGGGCCTCGGCCACAATGCGGGTGCCACGCAGTTCCACCGGGGCGGGCTCGGGGCCGGTCTCGGCGGGCCCGGCGGCGGGATGGGCGGGGCCCGGCTCAACGGGGCGGGGGCCGGTGGCACCCCGGTCTTCCGCGGCGGCCAGGGCCTTGGCACGAACCCGATGGCGGGGGGGCTCGGGCGACAGAACTTCGGCGGCGGGCTCGCCCATCAAGGTTTGACCGGCTCGACCTTCAACCACACGAACGCGCTTTCGCCATCCCGAAACCTCGGCGCACTCGGCGCCGGCAACGCGCCGGCGATCCACCGCGGAAATATCGGGGGCGCCGGCGGGCTCGGTGGCAACCCGATCGGCCGTGGAAATATCGGGGGTGTCGGTGGACTTGGTGGCAACCCGATCGGTCGTCCCGGCGGGCTCGGCGGTAGCCCGATCGGCCGCGTCGGTGGCGGGCTCTCGCCCTCATTCCACGCCGGGGGCCTTGGCGGCGGGTTCAACGCCCCGCATATGGGCGGCTTGAACGCCTCCCGCATGGGCGGGTTTGGCGGTACGCCGCACATGGGGGGGGGCTTCAGCGCCCCGCACATGGGCGGGGGTGGTTTTAGCGCCCCGCATGTGGGCGGCGGTTTTAGTGCCCCGCACATGGGCGGGTTTAGTGGCGGCCACATCGGAGGCGGTGGATTCCACGGCGGTGGCGCTCACATGGGCGGGTTTGGTGGCGGCGGCCACATGGGCGGCGGCGGTTTCCACGGCGGCGGTGGCGGGCACGGCGGCGGTCACCGCTGA
PROTEIN sequence
Length: 483
FGGLGWGGLGWGGWGWGGGWGGWGGWGGGWGGWGGGWGGWGFHRHYPFFPGGGRRWAGNWNNGGWNNGWNHGGNWNRGGGWNNGGWSNWGGPRGGWNSGTGFNRGGGWNNRLTNMGGVGGHGALAANALGRSPMARHGGAFAPPSSRPYANPFMHQASSAVGGQGVARHAVSRGPVGANWTAGYNGVHNAAFQRNAARSSFTGAGFGHSALPQNAARSPLTGAGLGHNAGATQFHRGGLGAGLGGPGGGMGGARLNGAGAGGTPVFRGGQGLGTNPMAGGLGRQNFGGGLAHQGLTGSTFNHTNALSPSRNLGALGAGNAPAIHRGNIGGAGGLGGNPIGRGNIGGVGGLGGNPIGRPGGLGGSPIGRVGGGLSPSFHAGGLGGGFNAPHMGGLNASRMGGFGGTPHMGGGFSAPHMGGGGFSAPHVGGGFSAPHMGGFSGGHIGGGGFHGGGAHMGGFGGGGHMGGGGFHGGGGGHGGGHR*