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berkeley_reactor_200306_biofilm_scaffold_132579_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2917..4794)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 639.0
  • Bit_score: 770
  • Evalue 1.80e-219
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEB7_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 639.0
  • Bit_score: 770
  • Evalue 1.30e-219
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 639.0
  • Bit_score: 770
  • Evalue 3.60e-220

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1878
ATGAACGCCGACCGGAAGCGCCCGATCGTTTTGGCCCGGCCGCGATCGGCTAGCCCCGTCGCCTGGGCCCCCGCGCTGGCGTCCACGGCCGTCTGGCTGGCCGTATCGGCGTGGGGGGTTGTGCTCCTCCCCGCCGAAAAGCGGATTCCGTTCACCCTCGCCGCCGCGGCCGGGTTCGCCGTCAACCTGGGGATCGTCCTCGGGACAGAGCGGGGTCGTTGGCTCATGCCGCTGCGTCGACTTGCGGAGAAGGTCGACGCACTCGCCCAGGCGGTGTATTCGACCGGCGACATGGTCAACCGGCTCGAACCCAAGCTCCTGCGGTGGATCGAGTCGAGCCCGGCCGAGCAGAAGTTTCTCGGCTGGGACCTCGAACACCTCCGGGAGAAATCGTTCCTGGAGATCGTTCACCCCGACGACCTGGCGCGGGTACGCGAGGCCCTCCGCTCCGCGAAGATCAAGGGCGAGATTCATGGCTTGATCCTGCGGATCCGCACGGCGTACGGCAAGCCTCGGGCGATCGAGATCAACGTCGGCGCCCGCTACGCCCCGGACCTCACCATCAGCCACCTCCGCTGCCACGTCACCGACGTCACGTCCAAGGTCCGCGCCGAGCGGGAATTGAAGCTGCGGACCCGTGAACTGACCCAGGTGAACGAACAGCTTCGGTTCATCAACCGCGAGTTGGAAGAACTCAAGGAACGATACCGCGACCTCTATCAAAACGCGCCCGCGATGTATTTCAGCCTCGACGACGAGGGGCGCATTCTGGAGTGCAACGACACGCTCCTCCGCACCCTCGGCTATCGCCGTGAAGCGATCGTCGGGCAATCATACGAACGGCTCATGCCCGAGGCGATCCGGTCGAAGTTCGCGGAGCGGTTCGCCGAGTTCCTGAAAGCCGGGACGATTGAATTGGCCAGTCAGTGGGTCAAGGCCGGTGGGGAGGTGATCGACGTCTGGGTTACCGGCACCGCCGTGCGCGGGTCTGACGGCCGGTTGGTCCATTCCCGAAGCGTCGCCCAGGACGTTACCGCCCGCCATCGCCTCGAAGATGAACTCCAGGAGAAGAACGCGCGGCTCGCCCGTACGAACGACGAACTCTCCCGCCGCAACAAGGAAATGGACGAGTTCACGTACGTCGTTTCCCACGACCTCCAAGAGCCTCTCCGCACGCTGATCGCCTTCTCCGACTTCCTCCTCCGCGACTACGGCGACCGCCTCGACGCCGAAGGGCAAGAATTCGTCCGCTACATCGTCGACGCCTCGCGTCGGATGCGCGACCTGATCCACGACCTCCTCAACCTCTCACGAGCCGGGAAGGTGACCGCCGACTTCGGGCCGGTCGACCTTACCGCGTTGATCCCGGTCCTCCGCGCCGACCTCGCCGAGTTGATCCGCAGTAAAGGGGCGGAAGTGCGCGTCGACGGCCCGCTCCCCGAAGTCTGGGGCGATCGGGCCAGGATCGGGCAACTCCTGTCGAACCTGATCGGGAACGGCCTGAAGTACAACGACAAGGCCGACCCCTACGTGGAAATCGGCACCGTCCCCGAACCCGAAGACGGCTGGGTGACACTCGCCGTGCGGGATAACGGGATCGGGATCGAGCCCCAGTTCTATTCGAAAATATTCCAACTGTTCCGGCGACTTCACACCCGGGAAGAGTACGAAGGGACCGGGGCCGGGTTGGCCATCTGCTCCAAGATCGTCCAGGCCCACGGGGGCCGGATCTGGGTGGAGAGCGAACCCGGCCGAGGTGCCACATTTTTCGTCCGCCTGCGCCGCCGGCCCGTCGAGCCCGCTCCCGACGCCGGAGACGGTTCCAAGGCCGACGCGGTTCCCCCTGCACTGTCCAGCGAAGTGACTCATGCGACCTGA
PROTEIN sequence
Length: 626
MNADRKRPIVLARPRSASPVAWAPALASTAVWLAVSAWGVVLLPAEKRIPFTLAAAAGFAVNLGIVLGTERGRWLMPLRRLAEKVDALAQAVYSTGDMVNRLEPKLLRWIESSPAEQKFLGWDLEHLREKSFLEIVHPDDLARVREALRSAKIKGEIHGLILRIRTAYGKPRAIEINVGARYAPDLTISHLRCHVTDVTSKVRAERELKLRTRELTQVNEQLRFINRELEELKERYRDLYQNAPAMYFSLDDEGRILECNDTLLRTLGYRREAIVGQSYERLMPEAIRSKFAERFAEFLKAGTIELASQWVKAGGEVIDVWVTGTAVRGSDGRLVHSRSVAQDVTARHRLEDELQEKNARLARTNDELSRRNKEMDEFTYVVSHDLQEPLRTLIAFSDFLLRDYGDRLDAEGQEFVRYIVDASRRMRDLIHDLLNLSRAGKVTADFGPVDLTALIPVLRADLAELIRSKGAEVRVDGPLPEVWGDRARIGQLLSNLIGNGLKYNDKADPYVEIGTVPEPEDGWVTLAVRDNGIGIEPQFYSKIFQLFRRLHTREEYEGTGAGLAICSKIVQAHGGRIWVESEPGRGATFFVRLRRRPVEPAPDAGDGSKADAVPPALSSEVTHAT*