ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_156783_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(42..1109)

Top 3 Functional Annotations

Value Algorithm Source
PEP-CTERM motif protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAR4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 381.0
  • Bit_score: 327
  • Evalue 9.40e-87
PEP-CTERM motif protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 381.0
  • Bit_score: 327
  • Evalue 2.70e-87
PEP-CTERM motif protein {ECO:0000313|EMBL:AGA26464.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 381.0
  • Bit_score: 327
  • Evalue 1.30e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1068
ATGCCGGCTTGGCGCCGTTCCTGGTGGTTTGCCGTGGTGCTCGTGTCGGCCTTGGGGACGCAAGCCCAGGCCGGCCCGTTGTCGTCGAACGGCGGCCCGTGGAATTGGTGGTCATCCGGACAGGACGGCGGGACGTGGAACGGGTCGTCCGGCGCCGCGAACCCTTGGACCCCGTCGGCCAACGCCACACCGCCCCCGCCCCCGGCACCCGAGGCCGGGGGCGGTCGGCCTACCTTCTCGGCCTCCTCTTTCGCCGCCACGACGCCGTCGCCGACCCCGGTTTCGGGGACCACGTTCGACGCCTTTCTAAATTTCGGGAACGGCGCCTACGCCGAGGCGAACCCCCTGACGACCGGGACGATCCGCCCCTGGTACGAAAGCCCGGCCGTCAGCAAGGTCTTCGGCGGCACCCCTACGCCCGGCCAGCGGTCGGCTTTCGCGAACGAGGTGCTCGACGGCGTCAAACGGACCTATCAACTGAGCGGCATTCCGGTTGGCCTGACCCTCGACCCCAAAGCCGACGCGAACCACACCATCAGCGTCGTCTCCGGCGCGTCGTTCCCCGGCAACCCCAACGCGGTCGGGATCGCCTACGTCGGCGGCAGCGGGTTCAGCTTCATCGATAAGTTGAACCAGACGCAGTCGGTCGACCAACTCGCCTGGGCCGTCGCGCACAACGTCGCGCACGAACTGATGCACTCGTTTGGCGTCGCCACCCACCACGACCAGACGGGGGAATACCTCGACGCGGCGAAGGCCGACTGGTCGATGCTCACCGACCCGGACACGACCTTCAGCCCGGCGGCCACCCAGGACATCCGTTCGAGCCTCTCCCAGGCGCGTACGTACGCGTCCCTACAATCCCGTACGGAGTTACTCGGCCTCACCCACAAGGCGCAATGTACGTGCCCGCTCTGCCGCCGGGGCTACGAGCTTAACCTCGCCCCATCCCCCGTCCCCGAACCCGCGACCTGGGCCTTTTGGTGCCTCGGAGCCGCGGCGGTCCTCGCCCGGCGCAAGGCGACGAGGGGCCGGGTGCGGCCTAGAACCACGCCCGAGTCAAGGTGA
PROTEIN sequence
Length: 356
MPAWRRSWWFAVVLVSALGTQAQAGPLSSNGGPWNWWSSGQDGGTWNGSSGAANPWTPSANATPPPPPAPEAGGGRPTFSASSFAATTPSPTPVSGTTFDAFLNFGNGAYAEANPLTTGTIRPWYESPAVSKVFGGTPTPGQRSAFANEVLDGVKRTYQLSGIPVGLTLDPKADANHTISVVSGASFPGNPNAVGIAYVGGSGFSFIDKLNQTQSVDQLAWAVAHNVAHELMHSFGVATHHDQTGEYLDAAKADWSMLTDPDTTFSPAATQDIRSSLSQARTYASLQSRTELLGLTHKAQCTCPLCRRGYELNLAPSPVPEPATWAFWCLGAAAVLARRKATRGRVRPRTTPESR*