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berkeley_reactor_200306_biofilm_scaffold_160899_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1..510

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7B3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 68.0
  • Bit_score: 72
  • Evalue 3.40e-10
Helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 68.0
  • Bit_score: 72
  • Evalue 9.60e-11
Helix-turn-helix protein {ECO:0000313|EMBL:AGA25132.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 68.0
  • Bit_score: 72
  • Evalue 4.80e-10

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 510
CGGAACTCCCTGGCCCGGAAGCGGTCCAAGGGCGAGCGGCTCGGCCAGGTCCCCTACGGCGTCCGCCTCGACACCGACGGCCGCACCCTCGCCCCCGACGCGGCCGAGGCCGAGGCCGTCGCGTTCGCCCGCGCCAGGCGGGCCGACGGTTGGTCGCTGCGTCGGATCGCCCGGGCGCTCGACGAACGCCTCCCGCCGAAGAACGGGGGACCGCGGTGGTCCCCCTCGACCGTCCACCGACTGACGAAAGGGTCCGCCATGCCCCCGCCGAAGCGACCGCCGAAGGCGCCGTCGCGTAACGAGCTCCCCTCCGACAAGCTCCGGGCCGTGATCGTCGCCCGGGGCCTGTCCGCCTCGGCGATCGCCCGCGCCGCCGAGGTCGCCCCGTCGATGCTGACCCGCTTCCTCGCCGGCGACCGCGGGCTGAGCCTCGACACGTTCGACCGCGTCTCCCAGGCCCTCGGCCTGAAGCTGGTCGAGGGCGGCCGCCGTGACCTGACGCGCGGCTAA
PROTEIN sequence
Length: 170
RNSLARKRSKGERLGQVPYGVRLDTDGRTLAPDAAEAEAVAFARARRADGWSLRRIARALDERLPPKNGGPRWSPSTVHRLTKGSAMPPPKRPPKAPSRNELPSDKLRAVIVARGLSASAIARAAEVAPSMLTRFLAGDRGLSLDTFDRVSQALGLKLVEGGRRDLTRG*