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berkeley_reactor_200306_biofilm_scaffold_162221_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4899..6482

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 521.0
  • Bit_score: 884
  • Evalue 4.20e-254
2-isopropylmalate synthase n=2 Tax=Singulisphaera acidiphila RepID=L0DPM5_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 521.0
  • Bit_score: 884
  • Evalue 3.00e-254
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 521.0
  • Bit_score: 884
  • Evalue 8.40e-255

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1584
ATGACCGAGATCGAGCCTAACGCGGACCGGATCCGAATTTTCGACACGACGCTGCGCGACGGCGAACAGTCGCCCGGCGCGAGCATGAACCTCTCCGAAAAGTTGGAAGTCGCGCGGGCACTCGCCGGACTCGGGGTCGATATCATCGAGGCGGGGTTCCCGATCGCCTCCCCGGGCGACTTCGAGGCGGTCCGCGCGATCGCCGCCGAGATCACCGGGTCGAGCATCTGCGGCCTGGCCCGCTGCAACGACCGCGACATCGACCGGGCCTGGGAGGCGATCCAGTACGCCCAGAGCCCCCGCATCCACATCTTCCTGGCCACCTCGGCCATCCACCGCGAGCACAAGCTCCGGATGACCAAGGCCCAGATCATCGACCGGGCCGTCGCCAGCGTCCGGCGGGCCAAGTCGTACTGCGCGGACATCGAGTTCAGCCCCGAGGACGCCGCCCGCACCGAGATCGACTTCCTCTGCGAAGTCGTCGAGGCCGCCATCGACGCCGGCGCGACCACGGTGAACATCCCCGACACCGTCGGCTACGCCGTCCCCTCGCAGTACGCCGCCGTGATCCGGACCCTGCGCGAGCGGGTCAAAAATATCGGCCGGGCGGTCATTAGCACCCACTGCCACGACGACCTGGGCATGGCCGTCGCCAACAGCCTGGCCGGCGTCGAGGCGGGGGCCAGGCAGGTCGAGTGTACGATCAACGGCATCGGCGAGCGCGCCGGCAACGCCGCGCTGGAAGAGGTCGTGATGGCCCTCAAGACCCGGGCCGACTACTTCGGCGTCCAGACCTCGATCAAGACCGAACGGCTCTACCCGCTCAGCCGGATGGTCTCCTCGATCACCGGCCTGGCCGTCCAGCGCAACAAGGCGGTCGTCGGCCGGAACGCGTTCGCCCACGAGTCGGGCATCCACCAGGACGGCATGCTCAAGGAGCGGTCGACCTACGAGATCATGCGGCCCGAGGAGGTCGGCGTCCCCAAGACCGACCTCGTCCTGGGCAAGCACTCCGGCCGCCACGCCCTCCGCGACCGCGTGGGCGACCTGGGCTACCACCTGACCGACGAGCAGATGGCGACCCTCTTCGACGACTTCAAGGCCCTGGCCGACAAGAAGAAGGAGGTCTACGACGAGGACATCATCGTGCTGATCGAGAAGCACATGGAAGACGTCCCCGCGTCGTGGCAGATGCTCAGCCTGCACACGGTCGCCGGCACCGGCGTGCTGCCGACGGCCACGATCTCGATCCGCCGCCCCGACGGCGAAGTCGTCCAGGACGCCGCGATCGGCGACGGCCCCGTCGACGCCATCTTCAAGGCCGTCGAGCGGGTCACCGGGGTCCACGCCAACCTCCGCGAGTTCGTCGTCCGGAGCGTCACTCAGGGGAAGGACGCGCAAGGCGAGGTCACGCTCGAACTCGAAGTCGAGAGCGGCGACCGCTCCTTCCGCGGCCGCGCCGCCTCGACCGACATCATTGAGGCCTCCGCCGAGGCCTACATCAACGCCGTTAACGCCATCAACGCCCGCCGCGACCGCGACCAACCCCGCGAGGTCATCGGCCGCCCCGGCGCGGGGGCGTGA
PROTEIN sequence
Length: 528
MTEIEPNADRIRIFDTTLRDGEQSPGASMNLSEKLEVARALAGLGVDIIEAGFPIASPGDFEAVRAIAAEITGSSICGLARCNDRDIDRAWEAIQYAQSPRIHIFLATSAIHREHKLRMTKAQIIDRAVASVRRAKSYCADIEFSPEDAARTEIDFLCEVVEAAIDAGATTVNIPDTVGYAVPSQYAAVIRTLRERVKNIGRAVISTHCHDDLGMAVANSLAGVEAGARQVECTINGIGERAGNAALEEVVMALKTRADYFGVQTSIKTERLYPLSRMVSSITGLAVQRNKAVVGRNAFAHESGIHQDGMLKERSTYEIMRPEEVGVPKTDLVLGKHSGRHALRDRVGDLGYHLTDEQMATLFDDFKALADKKKEVYDEDIIVLIEKHMEDVPASWQMLSLHTVAGTGVLPTATISIRRPDGEVVQDAAIGDGPVDAIFKAVERVTGVHANLREFVVRSVTQGKDAQGEVTLELEVESGDRSFRGRAASTDIIEASAEAYINAVNAINARRDRDQPREVIGRPGAGA*