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berkeley_reactor_200306_biofilm_scaffold_162221_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(8975..10420)

Top 3 Functional Annotations

Value Algorithm Source
Soluble ligand binding domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWD1_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 172.0
  • Bit_score: 116
  • Evalue 5.80e-23
Soluble ligand binding domain protein {ECO:0000313|EMBL:ADV60818.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 172.0
  • Bit_score: 116
  • Evalue 8.20e-23
Soluble ligand-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 141.0
  • Bit_score: 115
  • Evalue 2.80e-23

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1446
CGGCTCACCCGCTGCGGCTTCGCCCCACAGGCCGTCGCCCCGGCGCTGAAACTCGGCCTGGGCCTCCCCGCCGTCCCGGACGCGTTGTCCGCGTCGACCCTGAAAGCCGCGTCCGGGTCCGGCTCGGTCCCGGGGGCGGTGCGTGCCCTGGTTCAAGGAGTCATCACGGACATGGCCTGGATCCAACTGAAAGCCGTCGCGGCGGGAGTCGCGACGGCCGCCCTCGCCTGCGGACTGGGCGTAACAACCGCCGCCCGGCTGAAGGCCGACGACCCTCCGAAACCGGAGTCCAAACCAGAGACGACGGCCGTAGCGGTCCCACTCAAACCCAAGGTTCTGGAGCCCGGAGACCGGCTACGGATCGAGGTACTTGAAGCCCTGCCCGGCCGCCCGATCAGCGGCGAGAGGCTCGTGCGACCCGATGGCACCGTCTCGCTCGGCTTCTACGGCGACGTCGACGTCGCCGGCCTCACAAGGCGCGAGGTCAAAGAGAAGGTCACTTTGCACCTGCGGAAATACCTGCCCGATAAGACCCTCGGACTGGTCGAATTCGACCCGGAAACCGGCAAGACACGTAACATCCCGGCGCAGGAATCGGACTCAGTCTTCGTGGACGAAAGTCCAACCTACTTGGCGAAGACCACTCCGTTCACCAGGAAGTCCGCCACGGACACCATCAGGCCGGGCGATTTCCTCATAGTTGATGTCCTTGAAGCCCTCCCGGGCCGCCCGATCAGCGGCGAGCGGTTGGTTCTGCCTGAAGGTGTCATCTCGCTCGGCTTCTACGGTGACGTCAAAGTCAGCGGCCTCACCCGGCGGGAGGCCAAAGCTCAGGTCGTTAAACACCTGAGTAAATTCCTGCCCGACGACGTCCTCGGCCTCGTCGAAGAGACGGAGACGGGTAAGGAGATTAAGATCGACCCGGCGGACTCAAACCGGGTCTACGTCGACGACAGCCCTTCCTTTGAGAAACGGCCCGTCAATTTCCCCACCCAGGCGAGCCCGACCCGGGTCCAGCCCGGCGATCAGATCTTGGTCGAAGTCCTTAGAGCGCTCCCCGGCCGCCCGATCAGCGGCGAGCGACTTGTCCGACCCGACGGCACCATCTCGCTCGACTTCTACGGCGACGTCGCCGTCGCCGGCCTCACAAGGCGCGAGATCAAAACCAAAATCGTCGAACACCTGCGAAAATACCTGCCCGACGAGGTGCTCGTAACCGAAATCGACCCGAAAACCAAGAAGCGGATCGACGTGGCGCCGGCCGACTCGCACCAAGTGTTCGTCGACGACGACCTCAAATATTGGCCGAAATCGACTTACAAGGAACAGGCCGGCGGCAAGCGAGCCAGGCCGGATGAGAAATGGGAAGAGTTCGAGCGGCTACGGCAGAGGGTGAATGCGCTGGCCAAAGAGGTTGAGGCGCTGAAAAAGCGGGGCGGGAATTGA
PROTEIN sequence
Length: 482
RLTRCGFAPQAVAPALKLGLGLPAVPDALSASTLKAASGSGSVPGAVRALVQGVITDMAWIQLKAVAAGVATAALACGLGVTTAARLKADDPPKPESKPETTAVAVPLKPKVLEPGDRLRIEVLEALPGRPISGERLVRPDGTVSLGFYGDVDVAGLTRREVKEKVTLHLRKYLPDKTLGLVEFDPETGKTRNIPAQESDSVFVDESPTYLAKTTPFTRKSATDTIRPGDFLIVDVLEALPGRPISGERLVLPEGVISLGFYGDVKVSGLTRREAKAQVVKHLSKFLPDDVLGLVEETETGKEIKIDPADSNRVYVDDSPSFEKRPVNFPTQASPTRVQPGDQILVEVLRALPGRPISGERLVRPDGTISLDFYGDVAVAGLTRREIKTKIVEHLRKYLPDEVLVTEIDPKTKKRIDVAPADSHQVFVDDDLKYWPKSTYKEQAGGKRARPDEKWEEFERLRQRVNALAKEVEALKKRGGN*