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AR_MS4_05142019_scaffold_134741_1

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 2..1123

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 377.0
  • Bit_score: 282
  • Evalue 8.80e-73
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003663FCB similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 375.0
  • Bit_score: 593
  • Evalue 1.30e-166
mfd; transcription-repair coupling factor mfd (superfamily II helicase) similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 379.0
  • Bit_score: 266
  • Evalue 5.90e-69

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Taxonomy

Methylacidiphilum fumariolicum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1122
CCCAAACAGGCGGTCGCCCTGGCCGGAGCCATGGAAGCCTGGGGCTGGCAGATTCCCGTTCTACCGCAAAGCGCGCCCCTGCCAGAGGGAGCTCTTCCGGATCTCGACCTAGCGGCTTCCCGGCTGCAGGTCGCCGCGTCGCTCCTCCGGAAGGAGCTTCCCGCCCTGATCGCGACTCCGGCTGCCCTACGTCAGCCCGTGCCGACACCAGAGGCTTTGCAAAAGAGCACAATCCGGCTCTCTCCGGAAATCTCCCTGGATCGGGAAACTCTCTTGAAAGAACTGGCCGCCGCCGAGTTCGAGCGATGCCCGCGCGTGAGCGTCCGGGGACAGATGAGCGTACGAGGAAGCATCGTAGATCTTTTCCCCTGGACGGCCGCCTCCCCGCTGCGAACGGAGTGGGAGGGAGACGCCCTCTCTTCCCTTCGGGAGTTCGACCCCGTCTCCCAGCGCTCTCTGCAGACCCTCGCTTCTGTCACGATCCCCCTTCTCCCCCCGGTCGAGCTTGCGGAGGGTCCGACGACGACCTTGGAGAACTACCTCCCCGACGAGCGGTGCCGCTTCCTTGCCGGCGGCACCTCGGAGCAAGGAGGCGATACCCTGGAGCCGGAGCCGGATTTCCATGAACACGATTTTCTGGGTATGCCGCGAGAAGACCGACTGATTCGGGAAAACCGATGGACGCTTTTCGCGACCGAGCTTCGCCGCTGGCTCACCGAGCAATGGGATGTTGGAATCTTTGTCAACAACGAGGGGGAAGAAAAGCGCCTTGAGGAGCTCTTGGCGGCGGAGCGGATCGATCCAGCGGGGATTACCTGGATTCCGGGAGTTCTGACTCGTGGGTTTTCCTGGCCCGCCGAGCGGATCGCGATTCTCAGCGATGCCGAAATCTTCGGCCGATACCAGACGCTGCCGCACCGGGGAAAGCAGGCGCAGGACGCCGTGGAGGTCCGGCCGGTCGAAACTTCTTTCGCGGAATGGCGGCCGGGAGATTTTGTTGTTCATCTCCAGCACGGGATCGGCCGCTACAAAGGTGTGGAAGCTCTTCCGGACGGGGGGCAAGAAGCGCTACTCCTGGAATTTGCCGAAGGATCCAAGCTGTTCGTGCCGATCGACCAGAGC
PROTEIN sequence
Length: 374
PKQAVALAGAMEAWGWQIPVLPQSAPLPEGALPDLDLAASRLQVAASLLRKELPALIATPAALRQPVPTPEALQKSTIRLSPEISLDRETLLKELAAAEFERCPRVSVRGQMSVRGSIVDLFPWTAASPLRTEWEGDALSSLREFDPVSQRSLQTLASVTIPLLPPVELAEGPTTTLENYLPDERCRFLAGGTSEQGGDTLEPEPDFHEHDFLGMPREDRLIRENRWTLFATELRRWLTEQWDVGIFVNNEGEEKRLEELLAAERIDPAGITWIPGVLTRGFSWPAERIAILSDAEIFGRYQTLPHRGKQAQDAVEVRPVETSFAEWRPGDFVVHLQHGIGRYKGVEALPDGGQEALLLEFAEGSKLFVPIDQS