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AR_MS4_05142019_scaffold_1736

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1736_31
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36219..36323
-----------------
DNA (105bp)
protein (35aa)
Uncharacterized protein id=3495215 bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1736_32
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36366..39221)
-----------------
DNA (2856bp)
protein (952aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39RU7_GEOMG
hypothetical protein
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1736_33
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39319..40332)
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LYY7_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM18719.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
AR_MS4_05142019_scaffold_1736_34
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40329..42263)
-----------------
DNA (1935bp)
protein (645aa)
Surface antigen (D15) id=2137972 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
surface antigen (D15)
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1736_35
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42302..44071)
-----------------
DNA (1770bp)
protein (590aa)
phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase, alpha-D-glucose phosphate-specific id=4953704 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
AR_MS4_05142019_scaffold_1736_36
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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44334..44696
-----------------
DNA (363bp)
protein (121aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGK5_METP4
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADN35216.1}; Flags: Precursor;; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
AR_MS4_05142019_scaffold_1736_37
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44886..45203
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3W1_DESRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV69108.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
AR_MS4_05142019_scaffold_1736_38
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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45312..45974
-----------------
DNA (663bp)
protein (221aa)
GGDEF domain protein (Selenocysteine protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QKB9_DESAH
diguanylate cyclase
GGDEF domain protein (Selenocysteine protein) {ECO:0000313|EMBL:ACN13990.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
AR_MS4_05142019_scaffold_1736_39
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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45995..46507
-----------------
DNA (513bp)
protein (171aa)
Thioesterase superfamily protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CPW9_SYNLT
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADI02747.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
AR_MS4_05142019_scaffold_1736_40
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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46580..47446
-----------------
DNA (867bp)
protein (289aa)
Dihydropteroate synthase DHPS n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TFJ2_DESML
Dihydropteroate synthase DHPS {ECO:0000313|EMBL:EPR35992.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
dihydropteroate synthase DHPS
AR_MS4_05142019_scaffold_1736_41
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47395..47658
-----------------
DNA (264bp)
protein (88aa)
Methyltransferase type 11 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC57_GEOUR
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ24840.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
AR_MS4_05142019_scaffold_1736_42
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

47722..48900
-----------------
DNA (1179bp)
protein (393aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K242_DESAC
4Fe-4S ferredoxin
Tax=BJP_IG2069_Spirochaetales_48_31
AR_MS4_05142019_scaffold_1736_43
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

49334..49669
-----------------
DNA (336bp)
protein (112aa)
C_GCAxxG_C_C family protein id=3331074 bin=GWB1_CP_36_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
C_GCAxxG_C_C family protein
Tax=GWB1_Spirochaetes_36_13_curated
AR_MS4_05142019_scaffold_1736_44
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49659..50648
-----------------
DNA (990bp)
protein (330aa)
Putative uncharacterized protein id=4530827 bin=GWF2_Geobacter_54_21 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
AR_MS4_05142019_scaffold_1736_45
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50677..51336)
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YH56_9BACT
channel protein, hemolysin III family
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1736_46
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51804..53996
-----------------
DNA (2193bp)
protein (731aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
chemotaxis protein CheA n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B4B494
signal transduction histidine kinase CheA
AR_MS4_05142019_scaffold_1736_47
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

53993..54433
-----------------
DNA (441bp)
protein (147aa)
Response regulator receiver modulated protein serine/threonine phosphatase n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TEH4_CALNY
response regulator receiver modulated protein serine/threonine phosphatase
Response regulator receiver modulated protein serine/threonine phosphatase {ECO:0000313|EMBL:ADR18300.1}; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
AR_MS4_05142019_scaffold_1736_48
unknown

Not on your lists

54437..54559
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1736_49
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

54583..55656
-----------------
DNA (1074bp)
protein (358aa)
cheA; chemotaxis protein CheA (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
archease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B33DB0
AR_MS4_05142019_scaffold_1736_50
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55767..56543
-----------------
DNA (777bp)
protein (259aa)
Protein FdhD homolog id=2820364 bin=GWC2_Syntrophobacterales_56_13 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
protein fdhD
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1736_51
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

56614..56820
-----------------
DNA (207bp)
protein (69aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5N4_DESIS
4-oxalocrotonate tautomerase family enzyme
AR_MS4_05142019_scaffold_1736_52
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56834..57331
-----------------
DNA (498bp)
protein (166aa)
Lipopolysaccharide transport periplasmic protein LptA id=3668290 bin=GWC2_Syntrophus__56_31 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2102_Syntrophobacterales_60_12
AR_MS4_05142019_scaffold_1736_53
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57412..58074)
-----------------
DNA (663bp)
protein (221aa)
Outer membrane OmpA family protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQF8_SYNAS
outer membrane OmpA family protein
Outer membrane OmpA family protein {ECO:0000313|EMBL:ABC76075.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
AR_MS4_05142019_scaffold_1736_54
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58124..59173)
-----------------
DNA (1050bp)
protein (350aa)
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15)
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:AEG16315.1}; EC=1.1.3.15 {ECO:0000313|EMBL:AEG16315.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
(S)-2-hydroxy-acid oxidase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI10_DESK7
AR_MS4_05142019_scaffold_1736_55
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59551..59877
-----------------
DNA (327bp)
protein (109aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNY4_METH6
cupin
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
AR_MS4_05142019_scaffold_1736_56
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60118..62601)
-----------------
DNA (2484bp)
protein (828aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH27_9DELT
signal transduction histidine kinase, nitrogen specific, NtrB
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
AR_MS4_05142019_scaffold_1736_57
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62650..63420)
-----------------
DNA (771bp)
protein (257aa)
surE; stationary phase survival protein SurE (EC:3.1.3.2)
5'-nucleotidase SurE id=4743639 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Displaying items 31-57 of 57 in total

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