ggKbase home page

cn_combo_scaffold_4670_14

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: 14390..15082

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator TetR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4H0_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 134
  • Evalue 1.00e-28
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 134
  • Evalue 2.80e-29
Transcriptional regulator TetR family {ECO:0000313|EMBL:ACM39768.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 134
  • Evalue 1.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
TTGAGGGCGGCCGCGGCCTCCGGCGGCGACGCCCTGGCGCTGCGCAACACCCCCTCGCAGCGCCGGGCGCATCAGCGCATGGCCGCCATCCTGGAGGCCGCCCACGCGGTTCTTCGCCGGGACGGGGCGGAGGCGGCCACCGCCACCGCCATCGCCCAGGAGGCCGGCGTCGCGGTCGGCTCCTTCTATCACTACTTCCCCAACAAGGAGGCGGCGTTCCTCGCCCTCTATGAAGGCAAGCTGGCCGAGCTGCGGGCCTTCGCCGCCGCCACGCCGCTCGCGGCCGGCGATCGGCGCCAGGCCCTGCGGACCTGGGTGATCGCCTTGAAGGAAGAGGAGCTGCGGATCGGCTTCGACTTCGCGCTGTTCGACGCGGTCCATCATTATGGCAAGCTCTCGCCCATCGCCTCGCGCCATGCCGAGGCCATGGCCCTGGCGACGGCCGCGCGGGCGCGCCAGCTCGGCTCGGCCTGGTCGGATGCGGCGCTGTTCGACATCTGCCTCAGCGCCTTCTTCATGAACGGCAGCTCGTGGCTCTACTGGCGCGCCTCGGGCGGCTATGCGCCCCGCGCCATCACCCGCCTGGCCGACGCGGTCGTCGCGGTGCTGGAGCCGGCCCTGGACGGCTCGCCCGAACCGCCCGGCCCGCACCTGACGCCGCAGGGCGAGGACGGGCTTCTCGACGGCGCCTGA
PROTEIN sequence
Length: 231
LRAAAASGGDALALRNTPSQRRAHQRMAAILEAAHAVLRRDGAEAATATAIAQEAGVAVGSFYHYFPNKEAAFLALYEGKLAELRAFAAATPLAAGDRRQALRTWVIALKEEELRIGFDFALFDAVHHYGKLSPIASRHAEAMALATAARARQLGSAWSDAALFDICLSAFFMNGSSWLYWRASGGYAPRAITRLADAVVAVLEPALDGSPEPPGPHLTPQGEDGLLDGA*