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cn_combo_scaffold_5528_4

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: comp(2149..2691)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ2_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 180.0
  • Bit_score: 275
  • Evalue 3.70e-71
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 177.0
  • Bit_score: 290
  • Evalue 1.20e-75
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 275
  • Evalue 1.00e-71

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Taxonomy

R_Phenylobacterium_70_10 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TTGGGCGATCCGGACGAGGCGTTGCTGGCGCGCGTCGCCGATGGCGACCCCGCGGCCGTGCGCGCGCTGGTGGCCCGCAAGCTGCCCCGATTGCTGTCGCTGGCCGTGCGCATGCTGGGCGATGCGGCCGAGGCCGAGGACGTGGCGCAGGAGACCTTCGTGCGCGCCTGGAAGCAGGCGCGGGCCTGGCGGCCGGGCGTGGCCAAGTTCGACACCTGGATGCATCGGGTGGCGCTCAATCTCTGCTACGACCGGCTGCGCCGCCGCCGGGAAGCGCCGACCGACACCCCGCCCGAGGTGGTGGACGACGGGCCGGCGCCCGATCGGGGATTGCAGGCGATGGAGACCGGCGAGCGGGTGGCCGCGGCCATGCGGGCTTTGCCGGACCGGCAGCGGGAGGCGATCGTCCTCTGCCACTATCAGGAGCTCTCCAATATCGAGGCGGCGGCCCTGATGGGGGTCAGCGTCGAGGCGTTGGAAAGCCTGCTTTCCCGCGGGCGGCGCGCCCTGCGCGCGGCGCTGGCGGACATGGTGGGAGACTAG
PROTEIN sequence
Length: 181
LGDPDEALLARVADGDPAAVRALVARKLPRLLSLAVRMLGDAAEAEDVAQETFVRAWKQARAWRPGVAKFDTWMHRVALNLCYDRLRRRREAPTDTPPEVVDDGPAPDRGLQAMETGERVAAAMRALPDRQREAIVLCHYQELSNIEAAALMGVSVEALESLLSRGRRALRAALADMVGD*