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cn_combo_scaffold_6312_2

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: comp(758..1327)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor id=12555106 bin=CNBR_ACIDO species=Gloeobacter kilaueensis genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 125
  • Evalue 6.50e-26
Uncharacterized protein {ECO:0000313|EMBL:KFL37331.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 166.0
  • Bit_score: 123
  • Evalue 3.50e-25
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 173.0
  • Bit_score: 121
  • Evalue 3.40e-25

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Taxonomy

Arenimonas donghaensis → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGTCGGCGGGGTTTCATCAGGACGAGGCGACGCAGCCGCCGGTCGAGCGCCCCCGCCGTGCGGCCGAGGCCCTGATCGCCGCCTGCTATGACGACATGCGCCGGGTCGCCCGCGCGATCATCGCCCGCGACCAGATGCGCCTGGTGCTGCAGCCCACCGACCTGGTCAACGAGGCGGCGCTGCGGCTGATCCAATCCTCGCCGGATGCGATCTCCGACCAGGGCCACATGCTGGCCCTGGCCGCCCGGACCATGCGCCGCATCCTGATCGACGAGGCCCGCCGCAACGCGGCCGCCAAGCGCCGCTCGCCGCTGCTCACCCAATGGATCGAAGGCCCGTCCCAAAGGCTGGTCGATCTGGAAGACCTCGACCGCGCCCTGGCCGCCCTCGACGCCTATTCGACCGAACACGCCCGCGTGGTCGAGCTGCGCTTCGGCCTCGGCCTGACCGTCGAGGAGACCTCCCGCGCCATCGGCGTGCCCGAACGCACCGTCAAGCGCCGCTGGCAGGCCGCGCGCGCCTGGCTGCTGGACTATCTGAGCCCGGGCCTTGGCTCCGCTTCAGCCTGA
PROTEIN sequence
Length: 190
MSAGFHQDEATQPPVERPRRAAEALIAACYDDMRRVARAIIARDQMRLVLQPTDLVNEAALRLIQSSPDAISDQGHMLALAARTMRRILIDEARRNAAAKRRSPLLTQWIEGPSQRLVDLEDLDRALAALDAYSTEHARVVELRFGLGLTVEETSRAIGVPERTVKRRWQAARAWLLDYLSPGLGSASA*