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cn_combo_scaffold_10243_3

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: 2819..3400

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WE62_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 188.0
  • Bit_score: 243
  • Evalue 2.20e-61
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 191.0
  • Bit_score: 244
  • Evalue 1.40e-61
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 185.0
  • Bit_score: 239
  • Evalue 8.90e-61

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Taxonomy

R_Brevundimonas_68_13 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAACCAACAGGCTCAAGCGGACCACGACTTCAAGATCGAGCTGACCGGATTGATCCCGCAGATGCGGGCCTTCGCCCGGTCGCTGTGCCGCGACGCGGCGGCGGCTGACGACCTGGCGCAGGACGCGCTGCTGAAGGCCTGGAACAATCGCGCGAGCTACCAGCCGGGCACCAACATGAAGGCCTGGACCTTCATGATCCTGCGCAACCAGTTCTATTCCGACAAGCGCCGTTCGTGGCGCTCCAGCCAGCTCGACCCGGAAGTGGCCGAGCGCACCCTGGAGGCCGCCTCCAACCCGATCGCCAGCCTGGAGCTGGACGAGGTGCGCCGCGCCCTCGCCTGCCTGCCCGACGACCAGCGCGAGGCGCTGATCCTGATCGGCGCCGGTGGGCTGTCCTACGAGGAAGTGTCGGAAATCTGCGGCTGCGCCATCGGCACCATCAAGAGCCGCGTCAGCCGCGCCCGCGACCGGCTGGCCGCCATCATCGAGTCCGGCGACTACGGCCAGGACGAGATCCGGCCCTCCTCGGCCATGTCGAACATCATCGCCCAACTCGACGGCCTGCGCGCCGTCGCGTGA
PROTEIN sequence
Length: 194
MNQQAQADHDFKIELTGLIPQMRAFARSLCRDAAAADDLAQDALLKAWNNRASYQPGTNMKAWTFMILRNQFYSDKRRSWRSSQLDPEVAERTLEAASNPIASLELDEVRRALACLPDDQREALILIGAGGLSYEEVSEICGCAIGTIKSRVSRARDRLAAIIESGDYGQDEIRPSSAMSNIIAQLDGLRAVA*