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cn_combo_scaffold_43

Alias: PHE30_1

Search features with annotation key words

Displaying items 31-60 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_43_31
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38976..42950)
DNA (3975bp) protein (1325aa)
LVIVD repeat-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIF8_9SPHN
LVIVD repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
LVIVD repeat-containing protein
cn_combo_scaffold_43_32
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42958..44940)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A3BBD3
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_33
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44943..46895)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPE8_SPHAL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_34
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46892..48280)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0P3_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_35
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48478..50235
DNA (1758bp) protein (586aa)
Hemolysin activation/secretion protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PZL3_9CAUL
putative hemolysin activation/secretion protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
putative hemolysin activation/secretion protein
cn_combo_scaffold_43_36
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50253..53975
DNA (3723bp) protein (1241aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZX01_9CAUL
filamentous hemagglutinin outer membrane protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_43_37
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53972..57160
DNA (3189bp) protein (1063aa)
TPR repeat-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBJ1_9SPHN
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
TPR repeat-containing protein
cn_combo_scaffold_43_38
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57199..58854
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K8P3_9PROT
putative Glycosyl transferase-like protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
putative Glycosyl transferase-like protein
cn_combo_scaffold_43_39
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58954..59406
DNA (453bp) protein (151aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_43_40
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59606..61078
DNA (1473bp) protein (491aa)
Flp pilus assembly protein, secretin CpaC n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9H7_PHEZH
cpaC; Flp pilus assembly protein, secretin CpaC; K02280 pilus assembly protein CpaC Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cpaC; Flp pilus assembly protein, secretin CpaC
cn_combo_scaffold_43_41
unknown

Not on your lists

61139..61507
DNA (369bp) protein (123aa)

This feature has no annotations

cn_combo_scaffold_43_42
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61638..61829
DNA (192bp) protein (64aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_43_43
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62064..63878
DNA (1815bp) protein (605aa)
Cyclohexanone monooxygenase {ECO:0000313|EMBL:ABS63242.1}; EC=1.14.13.22 {ECO:0000313|EMBL:ABS63242.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae;
Cyclohexanone monooxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTK9_PARL1
cyclohexanone monooxygenase
cn_combo_scaffold_43_44
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63901..65862)
DNA (1962bp) protein (654aa)
Outer membrane cobalamin receptor protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0ES74_CAUCE
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:ENZ83827.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
TonB-dependent receptor
cn_combo_scaffold_43_45
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66217..66729)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GH28_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL29325.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
cn_combo_scaffold_43_46
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66720..67469)
DNA (750bp) protein (250aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGM8_CAUST
cobalamin 5'-phosphate synthase
cn_combo_scaffold_43_47
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67484..68512)
DNA (1029bp) protein (343aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGM7_CAUST
cn_combo_scaffold_43_48
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68509..70008)
DNA (1500bp) protein (500aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Cobyric acid synthase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5I4_CAUCE
cobyric acid synthase
cn_combo_scaffold_43_49
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69996..70943)
DNA (948bp) protein (316aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QM99_METTR
cobalamin biosynthesis protein CobD
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Ca
cn_combo_scaffold_43_50
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70933..71721)
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB521
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABZ71867.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
cn_combo_scaffold_43_51
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71718..72704)
DNA (987bp) protein (329aa)
Transport system permease protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGM3_CAUST
transport system permease rbh
Transport system permease protein {ECO:0000313|EMBL:ADG10466.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.
cn_combo_scaffold_43_52
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72701..73597)
DNA (897bp) protein (299aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Caulobacter crescentus OR37 RepID=R0D642_CAUCE
periplasmic binding protein
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:ENZ83825.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae
cn_combo_scaffold_43_53
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73594..74721)
DNA (1128bp) protein (376aa)
L-threonine O-3-phosphate decarboxylase {ECO:0000313|EMBL:ENZ83826.1}; EC=4.1.1.81 {ECO:0000313|EMBL:ENZ83826.1};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales
L-threonine O-3-phosphate decarboxylase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5I9_CAUCE
class I and II aminotransferase
cn_combo_scaffold_43_54
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75038..75667
DNA (630bp) protein (210aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J3AUK8_9CAUL
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:EJL38226.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Cau
cn_combo_scaffold_43_55
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75975..77012
DNA (1038bp) protein (346aa)
CobW n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BA2B
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31916.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
cobalamin biosynthesis protein CobW rbh
cn_combo_scaffold_43_56
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77012..80701
DNA (3690bp) protein (1230aa)
Cobaltochelatase, CobN subunit n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QN51_METTR
Cobaltochelatase, CobN subunit {ECO:0000313|EMBL:EJK79808.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
cobaltochelatase
cn_combo_scaffold_43_57
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80698..81327
DNA (630bp) protein (210aa)
CobIyrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EGF95431.1}; EC=2.5.1.17 {ECO:0000313|EMBL:EGF95431.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobac
cob(I)alamin adenosyltransferase (EC:2.5.1.17) rbh
CobIyrinic acid a,c-diamide adenosyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWM7_BREDI
cn_combo_scaffold_43_58
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81327..81701
DNA (375bp) protein (125aa)
metal-binding protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6C18
Metal-binding protein {ECO:0000313|EMBL:KFD29275.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoiku
hypothetical protein
cn_combo_scaffold_43_59
unknown

Not on your lists

comp(81916..82161)
DNA (246bp) protein (82aa)

This feature has no annotations

cn_combo_scaffold_43_60
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82386..83000
DNA (615bp) protein (205aa)
RNA polymerase sigma-24 factor n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE79_9SPHN
RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EAQ28066.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr
RNA polymerase sigma-24 factor
Displaying items 31-60 of 196 in total

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