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cn_combo_scaffold_532

Alias: PHE30_22

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_532_31
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43188..45023
DNA (1836bp) protein (612aa)
Phosphomethylpyrimidine synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8V3_PHEZH
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
thiC; thiamine biosynthesis protein ThiC
cn_combo_scaffold_532_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45136..45639
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVE2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34563.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
cn_combo_scaffold_532_33
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45658..46410)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS70_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_532_34
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46606..48969)
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NQU7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ77414.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
putative serine/threonine protein kinase
cn_combo_scaffold_532_35
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48962..49525)
DNA (564bp) protein (188aa)
ECF sigma factor family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C1Q3_HYPNA
ECF sigma factor family protein {ECO:0000313|EMBL:KCZ99386.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas
ECF sigma factor family protein
cn_combo_scaffold_532_36
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49794..50003)
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_532_37
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50142..51308)
DNA (1167bp) protein (389aa)
regulatory protein LuxR n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBCFE
rhiR; LuxR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_532_38
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51349..53868)
DNA (2520bp) protein (840aa)
oxidoreductase (EC:1.1.1.-)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Caulobacter sp. AP07 RepID=J3AQU6_9CAUL
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_532_39
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53865..54554)
DNA (690bp) protein (230aa)
ABC transporter related protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJB4_CAUST
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter
cn_combo_scaffold_532_40
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54621..55292
DNA (672bp) protein (224aa)
acyl-CoA thioesterase; K01076 [EC:3.1.2.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Lysophospholipase L1-like esterase n=1 Tax=Caulobacter sp. AP07 RepID=J2HPS8_9CAUL
G-D-S-L family lipolytic protein
cn_combo_scaffold_532_41
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55331..56188
DNA (858bp) protein (286aa)
beta-lactamase (EC:3.5.2.6)
Blr7890 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CA7_BRADU
Beta-lactamase {ECO:0000313|EMBL:ETX06759.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
cn_combo_scaffold_532_42
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56195..56899)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000381D49B
PDZ/DHR/GLGF domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_532_43
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57229..58443)
DNA (1215bp) protein (405aa)
Cytochrome P450 CYP125 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF20_PHEZH
cytochrome P450 CYP125 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cytochrome P450 CYP125
cn_combo_scaffold_532_44
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58568..59140
DNA (573bp) protein (191aa)
LemA family protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KL97_SHEWM
LemA protein {ECO:0000313|EMBL:CDO60703.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
LemA family protein
cn_combo_scaffold_532_45
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59137..60312
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KIG5_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA87016.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (st
cn_combo_scaffold_532_46
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60479..61609)
DNA (1131bp) protein (377aa)
NADPH:quinone reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA33_PHEZH
NADPH:quinone reductase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
NADPH:quinone reductase
cn_combo_scaffold_532_47
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

61667..62281
DNA (615bp) protein (205aa)
Chromosome undetermined scaffold_146, whole genome shotgun sequence {ECO:0000313|EMBL:CAK65238.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculi
cn_combo_scaffold_532_48
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62253..63707
DNA (1455bp) protein (485aa)
Signal transduction histidine kinase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VI45_CAUST
signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
signal transduction histidine kinase
cn_combo_scaffold_532_49
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63786..64295
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7W9_PHEZH
FKBP-type peptidylprolyl isomerase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
FKBP-type peptidylprolyl isomerase
cn_combo_scaffold_532_50
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64359..65108)
DNA (750bp) protein (250aa)
PREDICTED: uncharacterized protein LOC100829785 n=1 Tax=Brachypodium distachyon RepID=UPI000234DD52
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_532_51
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65407..67194
DNA (1788bp) protein (596aa)
long-chain-acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Acyl-CoA synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF23_PHEZH
long-chain-acyl-CoA synthetase rbh
cn_combo_scaffold_532_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67191..68219)
DNA (1029bp) protein (343aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GPI4_9CAUL
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AGU52816.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
cn_combo_scaffold_532_53
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68277..69767)
DNA (1491bp) protein (497aa)
Sensor histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF24_PHEZH
sensor histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
sensor histidine kinase
cn_combo_scaffold_532_54
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69866..71749
DNA (1884bp) protein (628aa)
UvrABC system protein C n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF25_PHEZH
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
cn_combo_scaffold_532_55
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71781..72551)
DNA (771bp) protein (257aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein id=4582632 bin=GWC2_Deltaproteobacteria_66_88 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG03505.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;
cn_combo_scaffold_532_56
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72737..75508
DNA (2772bp) protein (924aa)
Putative TonB dependent receptor n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PE62_CELJU
Putative TonB dependent receptor {ECO:0000313|EMBL:ACE85804.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio
putative TonB dependent receptor rbh
cn_combo_scaffold_532_57
unknown

Not on your lists

75827..75889
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying items 31-57 of 57 in total

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