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cn_combo_scaffold_188_87

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: comp(85349..86770)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 469.0
  • Bit_score: 647
  • Evalue 3.50e-183
Isopropylmalate isomerase large subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1XW14_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 468.0
  • Bit_score: 695
  • Evalue 5.10e-197
Isopropylmalate isomerase large subunit {ECO:0000313|EMBL:EGY02541.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 468.0
  • Bit_score: 695
  • Evalue 7.20e-197

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAGCGGTCCGCAGACGCTGTTCGACAGGATCTGGCGCACGCATCTCGTCCGGGCGCTTCCCGAGGACGTCGGCCTCGTCCTGATCGATCGCGTGCTGCTGCACGAGCGCACGGGCGGCGTGGCGCTGAAGAGTCTCCAGGCCGCCGGTCGCCCGGTGATGGCGCCCGCCCAGACCTTCTGCACCATGGACCACGTGGTCGACACCTTCCCCGGCCGTACGGACAAGACCGTGATGCCGACGGGGACGTCGTTCATCACCCAGACCCGCGACGCCGCGCGCGAAGCGGGCATCACGCTGTTCGACATCGGGGATGAAGGGCAGGGGATCGTCCACGTCATCTCGCCCGAGCACGCCCTGGTGCTGCCGGGCGCGACCCTGGTCTGTCCGGACAGCCACACCTGCACCCAGGGGGCGATGGGGGCGCTCGCCTGGGGGATCGGCTCCACCGAGGCCGAGCATGCGCTGGCCACCGGGACCTTGCGGATCGCCAGGCCGCGCACGATGCGGATCACGGTCGCCAACCGGCTCGCCCCCGGCGTGACGGCCAAGGACCTGGCGCTGGCGGTGGTGGCGAAGATCTCGGCGTCCGGCGCGCGCGATCACGTCGTCGAATACGCCGGCGAGGGTGTCGAGGCCCTGTCGGTCGAGGAGCGTCTCACCCTCTGCAACATGGCGACCGAGATCGCGGCGTTCACGGCGATCGTCGCGCCGGACGACAAGGTGTTCGAATACCTCGAGGGTCGGGCCTACGCGCCCAAGGGCGAGGCCTGGGACCTGGCGCTGGCCGAGTGGCGCGGGCTGCGCTCGGACCCGGACGCCGTGTTCGACAGGGAGGTGACCATCGACGCGGCCGAGATCTCCCCGATGGTCACCTGGGGCGTCAGTCCGCAGCAGGGGGCGCCCATCGGCTCGGCGGTCCCGGACTACGACGCGGTGGCGGACCGCGACAGCCGCGAGGCCTATGACCGGGCGCTGGGCTACATGGACCTGACGCCGGGCCAGCCGCTGGAGGGGCTGCCGATCGGCGCGGCGTTCATCGGCTCGTGCACGAACAGCCGGATCAGCGACCTGCGCCGGGCCGCGGCGCTGCTAAAGGGGCGACGCGTGGCGGCGGGCGTCAAGGCGATCTGCGTGCCGGGCTCGACGCGGGTGAAGCATCAGGCCGAGGCCGAGGGACTGGACCGCGTCTTCCTGGACGCGGGGTTCGAGTGGCGGGAGTCGGGTTGCTCCATGTGCTTCTTCGCCGGCGGCGAGAGCTTCGGCGAGCGCCAGCGGGTGGTGTCGTCCACCAACCGCAACTTCGAGAGCCGCCAGGGGCCGCAGACCCGCTCGCATCTGGCCTCGCCCGAGACGGTGGCGGCCTCGGCGATCCGCGGCGCCATCGCCGACCCCCGCAAGCTTGCTCCGGAGCCGGTCTGA
PROTEIN sequence
Length: 474
MSGPQTLFDRIWRTHLVRALPEDVGLVLIDRVLLHERTGGVALKSLQAAGRPVMAPAQTFCTMDHVVDTFPGRTDKTVMPTGTSFITQTRDAAREAGITLFDIGDEGQGIVHVISPEHALVLPGATLVCPDSHTCTQGAMGALAWGIGSTEAEHALATGTLRIARPRTMRITVANRLAPGVTAKDLALAVVAKISASGARDHVVEYAGEGVEALSVEERLTLCNMATEIAAFTAIVAPDDKVFEYLEGRAYAPKGEAWDLALAEWRGLRSDPDAVFDREVTIDAAEISPMVTWGVSPQQGAPIGSAVPDYDAVADRDSREAYDRALGYMDLTPGQPLEGLPIGAAFIGSCTNSRISDLRRAAALLKGRRVAAGVKAICVPGSTRVKHQAEAEGLDRVFLDAGFEWRESGCSMCFFAGGESFGERQRVVSSTNRNFESRQGPQTRSHLASPETVAASAIRGAIADPRKLAPEPV*