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cn_combo_scaffold_955_33

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 29529..30191

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF73_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 176.0
  • Bit_score: 233
  • Evalue 1.50e-58
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 173.0
  • Bit_score: 276
  • Evalue 3.70e-71
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 176.0
  • Bit_score: 233
  • Evalue 4.20e-59

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Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
TTGGCGGAGCGGCTGGAATACGGCATCTCTGGTCCGGCCGTTCTGGGAGACCGCCGCGCGAATGATCCGCCCGGAGACCTGCGCCGCCCCGCCCGCCCCCGCGCTCCGGCGCCGGGCATGAGCGCGCGCGCCGAACCGGGTCCGCAACGCCCGACCGACCCTCTGCTGGAAATCTTCCTCGAGCGCCGGGGCAACCTCCTGCGCTTCTACTCCGCCCGAACGGGGTCGCCCTCGCTGGCCGAAGATCTGGTCCAGGAACTGTACCTGAAGCTCGCTTCCCGCGACCCCGACGTGACCGCCGAGAATCCGGTCGCCCTGATCTATCGCATCGCCACCAACGTGATGCTGGACCGCGCACGCGGCGAGGCCCGCGCTGCGGCCCGCGACAGCGCCTGGCGGATCGTGGCCCACGCCAGTCTCGGCCGCGAGGATGTCGTCGACGCCGCGCCCGCCGACGAGGTGGCGGCCTCGCGCCAGCGCCTCCGCCAGCTCATAGAGGCGGCGGCCGACCTGCCCCCGCAGCAGCGGCGCGCGTTCCGCCTCCACAAGCTGGAAGGCCGGAGCCATGCCGAGACGGCGCGCGTGATGGGCCTGTCGGTCAAATCCGTGGAGAAGCACGTCTCGGCCGCCTTGAAGTCGCTCACCGCAAAGTTGGGGCGATGA
PROTEIN sequence
Length: 221
LAERLEYGISGPAVLGDRRANDPPGDLRRPARPRAPAPGMSARAEPGPQRPTDPLLEIFLERRGNLLRFYSARTGSPSLAEDLVQELYLKLASRDPDVTAENPVALIYRIATNVMLDRARGEARAAARDSAWRIVAHASLGREDVVDAAPADEVAASRQRLRQLIEAAADLPPQQRRAFRLHKLEGRSHAETARVMGLSVKSVEKHVSAALKSLTAKLGR*