Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
pseudouridine synthase B (EC:5.4.99.22) | similarity |
KEGG
DB: KEGG |
45.8 | 227.0 | 197 | 4.10e-48 | csd:Clst_0734 |
seg (db=Seg db_id=seg from=2 to=23) | iprscan |
interpro
DB: Seg |
null | null | null | null | csd:Clst_0734 |
seg (db=Seg db_id=seg from=176 to=187) | iprscan |
interpro
DB: Seg |
null | null | null | null | csd:Clst_0734 |
PSI_RSU (db=PatternScan db_id=PS01149 from=131 to=145 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | csd:Clst_0734 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=37 to=265 evalue=5.3e-62) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 5.30e-62 | csd:Clst_0734 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=37 to=265 evalue=5.3e-62) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 5.30e-62 | csd:Clst_0734 |
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=98 to=258 evalue=3.4e-55 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.40e-55 | csd:Clst_0734 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=90 to=265 evalue=4.3e-38 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.30e-38 | csd:Clst_0734 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=94 to=226 evalue=8.7e-16 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.70e-16 | csd:Clst_0734 |
S4 (db=HMMPfam db_id=PF01479 from=33 to=73 evalue=3.8e-11 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.80e-11 | csd:Clst_0734 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=33 to=99 evalue=2.7e-10) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.70e-10 | csd:Clst_0734 |
no description (db=HMMSmart db_id=SM00363 from=33 to=95 evalue=3.2e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.20e-09 | csd:Clst_0734 |
S4 (db=ProfileScan db_id=PS50889 from=33 to=96 evalue=13.821 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.38e+01 | csd:Clst_0734 |
pseudouridine synthase B (EC:5.4.99.22) Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated |
UNIPROT
DB: UniProtKB |
100.0 | 268.0 | 529 | 3.90e-147 | ggdbv1_89866528 | |
rsuA; 16S rRNA pseudouridylate synthase (EC:4.2.1.70); K06183 ribosomal small subunit pseudouridine synthase A [EC:5.4.99.12] alias=ACD51_69595.90668.11G0013,ACD51_69595.90668.11_13,ACD51_C00008G00013 id=73127 tax=ACD51 species=Synechococcus sp. RCC307 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=PER organism_desc=PER | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 528 | 1.10e-147 | csd:Clst_0734 |