Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) | rbh |
KEGG
DB: KEGG |
54.2 | 705.0 | 730 | 6.10e-208 | toc:Toce_1231 |
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) | similarity |
KEGG
DB: KEGG |
54.2 | 705.0 | 730 | 6.10e-208 | toc:Toce_1231 |
Polyribonucleotide nucleotidyltransferase n=1 Tax=Halothermothrix orenii H 168 RepID=PNP_HALOH (db=UNIREF evalue=0.0 bit_score=721.0 identity=50.49 coverage=98.7306064880113) | similarity |
UNIREF
DB: UNIREF |
50.49 | 98.73 | 721 | 0.0 | toc:Toce_1231 |
Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=708 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 0.0 | toc:Toce_1231 |
polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=8 to=705 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | toc:Toce_1231 |
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=143 to=705 evalue=8.2e-210 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.20e-210 | toc:Toce_1231 |
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=142 evalue=2.6e-43 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.61e-43 | toc:Toce_1231 |
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=307 to=461 evalue=3.1e-41 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.10e-41 | toc:Toce_1231 |
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=143 to=241 evalue=1.2e-32 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-32 | toc:Toce_1231 |
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=458 to=573 evalue=2.6e-28 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.60e-28 | toc:Toce_1231 |
Eukaryotic type KH-domain (KH-domain type I) (db=superfamily db_id=SSF54791 from=553 to=649 evalue=3.6e-24) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.60e-24 | toc:Toce_1231 |
no description (db=HMMSmart db_id=SM00316 from=633 to=703 evalue=1.1e-21) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.10e-21 | toc:Toce_1231 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=621 to=704 evalue=2.4e-21 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.40e-21 | toc:Toce_1231 |
RNase_PH (db=HMMPfam db_id=PF01138 from=12 to=142 evalue=2.2e-20 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.20e-20 | toc:Toce_1231 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=630 to=705 evalue=2.2e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.20e-19 | toc:Toce_1231 |
RNase_PH (db=HMMPfam db_id=PF01138 from=329 to=461 evalue=2.1e-17 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.10e-17 | toc:Toce_1231 |
S1 (db=HMMPfam db_id=PF00575 from=632 to=701 evalue=1.2e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.20e-16 | toc:Toce_1231 |
RNase_PH_C (db=HMMPfam db_id=PF03725 from=145 to=213 evalue=1.5e-16 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.50e-16 | toc:Toce_1231 |
KH_1 (db=HMMPfam db_id=PF00013 from=569 to=623 evalue=1.6e-12 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-12 | toc:Toce_1231 |
no description (db=HMMSmart db_id=SM00322 from=565 to=630 evalue=1.7e-12 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.70e-12 | toc:Toce_1231 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=241 to=326 evalue=2.9e-12 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.90e-12 | toc:Toce_1231 |
RNase_PH_C (db=HMMPfam db_id=PF03725 from=465 to=542 evalue=2.7e-08 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.70e-08 | toc:Toce_1231 |
PNPase (db=HMMPfam db_id=PF03726 from=248 to=325 evalue=3.2e-06 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.20e-06 | toc:Toce_1231 |
no description (db=Gene3D db_id=G3DSA:1.10.10.400 from=240 to=324 evalue=1.2e-05 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-05 | toc:Toce_1231 |
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=566 to=625 evalue=12.894 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.29e+01 | toc:Toce_1231 |
S1 (db=ProfileScan db_id=PS50126 from=635 to=703 evalue=19.661 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.97e+01 | toc:Toce_1231 |
PNPase (db=HAMAP db_id=MF_01595 from=1 to=706 evalue=28.161 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.82e+01 | toc:Toce_1231 |
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=77133 |
UNIPROT
DB: UniProtKB |
100.0 | 708.0 | 1376 | 0.0 | K2BNL8_9BACT | |
toc:Toce_1231 polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD51_C00032G00006,ACD51_49472.18326.10G0006,ACD51_49472.18326.10_6 id=73664 tax=ACD51 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=PER organism_desc=PER | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 1375 | 0.0 | toc:Toce_1231 |