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ACD51_57_13

Organism: PER_ACD51

near complete RP 49 / 55 MC: 15 BSCG 46 / 51 MC: 5 ASCG 0 / 38
Location: comp(15269..15823)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 180.0
  • Bit_score: 125
  • Evalue 1.40e-26
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=16 to=182 evalue=2.2e-38 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-38
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=109 evalue=5.7e-19 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.70e-19

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Taxonomy

RIFOXYC2_FULL_Peregrinibacteria_41_22_curated → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGATTCAGAAGAGCAGTTGATCTCGGCGGCGAAGGCCGATAAAACCGAGTTCGTGAAGCTGTATGACAAATACTTTAAGCAGATCTATAAATTTCTGCTTACTAGAGTTGCCGACGTACAGCTTGCCGAGGATTTAACTAGCGACACATTCATAATCGCGCTCGAGAAAATCGACTCGTTCGAGTACCAAGGCAAACCGTTTTCGTCTTGGCTATATCGAGTCGCGATAAACGAGCTGAATAAGCATTATCGCGCCGCGAGATCCGAACAAGAAGTTATGATCAGAAAATGGCACGAAGAAGGAGATAAGCTCGAAGCTGCCGACATAGAGTTATTGGAAGGCGAAAGCGAACAAGAAAAATTGCAAAACCTGAAGGTGATGAATGACGGAATAAGAAAATTAAAACAAGAGGATCAGGACATTTTGTCGCTTAAATATTTTGAAAATTTATCTTATCAAGAGATAGCTGAAATACTGGGAATAACCGTTACGAATGTTGGCGTGAAGCTGATGCGTGCAACTGAAAGATTATCAAAAACGTGTAATTTTTAA
PROTEIN sequence
Length: 185
MDSEEQLISAAKADKTEFVKLYDKYFKQIYKFLLTRVADVQLAEDLTSDTFIIALEKIDSFEYQGKPFSSWLYRVAINELNKHYRAARSEQEVMIRKWHEEGDKLEAADIELLEGESEQEKLQNLKVMNDGIRKLKQEDQDILSLKYFENLSYQEIAEILGITVTNVGVKLMRATERLSKTCNF*