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RTP_092018_0_1um_scaffold_17567_2

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(153..1646)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase id=12498631 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 424.0
  • Bit_score: 624
  • Evalue 8.90e-176
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 424.0
  • Bit_score: 489
  • Evalue 9.70e-136
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain {ECO:0000313|EMBL:AAZ97364.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 424.0
  • Bit_score: 489
  • Evalue 4.80e-135

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
TTGCCCCTGCAGCGGTTCAGCACCATCCTGGATCGAGAGGCGATCGCCTGGATCGTGCTCGGGATTACGGTGATCCTGACGATTGGCTTGTGGCGCTATTCCGAGACGGAATTTGCCAGGCGTGCAAACGAAAGTTTTGAAAACGACGCCAGAAAACAGGAAGCCCTCCTGCTCGGCCGCATGCAGGATTACGAGCAGGCGCTGCGCGGCGGTGCCGCCCTTTTTGCCGCGAAAGGCCGGGTTAGCCGCGCGGAATGGCACGCCTATGTCGAGATGCTCCACCTCGACAACGCCCTCCCCGGCATCCAGGGCACCGGCTTTTCACTCATGATCCCCAAGGGAGCGAAGCAACGGCACGAACGCAGCGTGCGTGCGGAAGGATTCCCCGCCTACACGATCCATCCGGCGGGCGATCGCACGATTGACAGCAGCATTCTTTATCTCGAACCCTTCAGCGGGCGGAATTTGCGCGCGTTCGGCTATGACATGTATTCCGATCCCGTCCGCCGCGAGGCCATAGAACGTGCACGCGATAGCGACAAAGCGGCACTGTCGGAAAAGGTCACGCTCGTCCAGGAAACGGGACGGCATGAACAAACCGGTTTCCTGATGTATCTCCCGGTCTATCGCAACGGTATGCCGCACGACACCGTGGCAGCGCGACGGCGTGCACTGCTCGGCTTCGTGTATAGCCCGTTCCGGGTGGCCGATCTGTTGACCAAGGTATTCAACGACCCCGCGCGGGAAGTTGAAATCGAGCTGTTCGACGATCAGCCGATGCCGGAAAATCTGCTCTTCGCCTCCACCGGTTCTGCGCATGTTTCACGCTATGTGGCCGACAAGGTTTTGCAGATGGGCGGTCATCGCTGGACTGCGCGCTTCAAAAGCAATCCTGTATTCGAATCGAGAACGGAAAGCGCCCAGCCCCGGATGATTCTTTTCGGCGGTCTTGCGCTCGACCTGCTGTTTTTCTCAGTCCTCTATATGAATGCGCGCCATCGCCGGGCGATGCGCAATGTGGTGGAAAAACTCGAAACCAGCCTCGACAGCTTCAGGGCCCTCGTCGAAAATGTCCCCGGAGCCGTGTTCCGGTCTGAAGTCGGGGCCTCCTCGCCGGTTCAGCAACTCAGCCACGGCATCCTGGCGCTCACGGGCGTGCCGCCGGAACGTTATGTTTCCGGGGCGGTTTCCTATGTCGATTTCATCCATCCGGACGACAGGCTCATGGTGGGCCAGACGATTTCCGAAGCGATCGCCAAACGGAGCATTTACAACATCGAATACCGCATCAGAACCNNNNNNNNNNNNNNNNNNNNNNNNNACGTCAGACCATGCCGGCCGGGCGCGATGGCTGGACGGCCTGATACTCGACATCACCGAACGCAAGGCCGCCGAAATCATGATTCGCGACCTTGCCTACAACGATCCGCTGACCGGACTGCCCAACCGCCGTCTTTTGCTGGACCGTCTCGAGCATCAACTCGCAGCCAGTAG
PROTEIN sequence
Length: 498
LPLQRFSTILDREAIAWIVLGITVILTIGLWRYSETEFARRANESFENDARKQEALLLGRMQDYEQALRGGAALFAAKGRVSRAEWHAYVEMLHLDNALPGIQGTGFSLMIPKGAKQRHERSVRAEGFPAYTIHPAGDRTIDSSILYLEPFSGRNLRAFGYDMYSDPVRREAIERARDSDKAALSEKVTLVQETGRHEQTGFLMYLPVYRNGMPHDTVAARRRALLGFVYSPFRVADLLTKVFNDPAREVEIELFDDQPMPENLLFASTGSAHVSRYVADKVLQMGGHRWTARFKSNPVFESRTESAQPRMILFGGLALDLLFFSVLYMNARHRRAMRNVVEKLETSLDSFRALVENVPGAVFRSEVGASSPVQQLSHGILALTGVPPERYVSGAVSYVDFIHPDDRLMVGQTISEAIAKRSIYNIEYRIRTXXXXXXXXXVRPCRPGAMAGRPDTRHHRTQGRRNHDSRPCLQRSADRTAQPPSFAGPSRASTRSQ*