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RTP_092018_0_1um_scaffold_19036_2

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: 1218..2723

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 506.0
  • Bit_score: 818
  • Evalue 5.40e-235
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 506.0
  • Bit_score: 818
  • Evalue 2.70e-234
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A190D similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 501.0
  • Bit_score: 981
  • Evalue 1.70e-283

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGGCGGCTGCTAGCTCGCATCCCGTTTCCGGCCTGGCCGCATCCCAAGCTATCCACGAGACGGTGCCGCATATTCTGGAACGGCTCGGGATTGCCGTCGGCGAACTCACCAGCGACAGCCGCAAGGCCGCGCCCGGCACCGTGTTCGCCGCCTATCCCGGCGAGGCGCGCGACGGGCGCGATTTCATTGCACAAGCCGTGGCGCGGCGTGTCGACGGCGTGTTGTGGGAAGCGGACCGCTTCCAGTGGGATCCGGCGCTGGACATTCCCAACGCCGGCGTGGTCGGGCTGAAGACCCGTATCGGCGAAATCGCCGCGCACGTATATGGCGAGCCTTCACGCGCGCTGCACATGGTCGGCGTCACCGGCACCAACGGCAAGACCTCGGTGGCACACTGGGTCGCTCAGGCCTTCACGCAACTGGGACGCAAGGCGGCCGTTGTCGGTACCGTCGGCAACGGCTTTCCACCCGTCGGGGCCTCGCCCGGCGCGCTGACGCCCGCGCTCAACACCACGCCCGATGCCATCGAGTTGCAGCAGCGTCTTGCGGCGTACCGACAGCAGGGCGCGGTTGCCTGTGCGATGGAAGTGTCGTCGCACGGGCTCGCACAAGGCCGCGTCAACGGCACCCGTTTCAATGTCGCCGTGCTGACCAATCTGTCGCGCGACCACCTCGATTACCACGGCAGCATGGAGAACTATGCCGATGCCAAGGCCCGGCTGTTCAGCTGGCCCGGGCTGCAATGGGTGGTGGTCAACGTCGACGATGAATTCGGGCGGCGGCTGGAAAGCGAAACCCGGCCCGCGCGCGTCGCCGGATACGGATTCCAGCGCGGTGCGGTGGTAGGAGAAAAGCTACATTTGTCCCAAGCCGGCTTGCACCTGCGGGTTCATACCGACTGGGGCAACGTCGAGTTCGATGTGCCATTGCTGGGGCGTTTCAACGCAGCCAATCTGCTGGCCGTGCTCACCACCTTGCTGGTTTCGGATGTGAAACTGGACGATGCCTGCCAGGCATTGGCCCATGTTACGCCGCCGCCGGGGCGGATGCAGACGCTTGGCGGCAATGTGCATCCACTGGTGGTCGTGGATTATGCCCACACGCCCGATGCGCTGGAAAAAGTACTCGCCACGCTGCGTGAAATCGCCGGCGGCGGGCGCCTCATCTGCGTCTTCGGCTGCGGCGGCAATCGCGACAAGGGCAAGCGTCCGTTGATGGGGCGGGCTACCGCCAAAGGCGCGGATGAAGTCTGGGTCACCAGCGACAACCCTCGCAACGAGGACCCGCATCAGATCATTCAAGACATTCTCGCCGGTATGAGCGGCAAGCCGCATATCGAGCCCGATCGTGCGCGCGCCATCTTCGAGGCCATCGGCGGCGCGCATCAAGGCGATGTGGTGCTGATCGCCGGCAAAGGCCATGAGGATTACCAGGAAGTGGCGGGCGAACGCCTGCCATTCTCCGACGTGGCTGTGGCGAAGAAGGCACTGGAGGCGTGGGCATGA
PROTEIN sequence
Length: 502
MAAASSHPVSGLAASQAIHETVPHILERLGIAVGELTSDSRKAAPGTVFAAYPGEARDGRDFIAQAVARRVDGVLWEADRFQWDPALDIPNAGVVGLKTRIGEIAAHVYGEPSRALHMVGVTGTNGKTSVAHWVAQAFTQLGRKAAVVGTVGNGFPPVGASPGALTPALNTTPDAIELQQRLAAYRQQGAVACAMEVSSHGLAQGRVNGTRFNVAVLTNLSRDHLDYHGSMENYADAKARLFSWPGLQWVVVNVDDEFGRRLESETRPARVAGYGFQRGAVVGEKLHLSQAGLHLRVHTDWGNVEFDVPLLGRFNAANLLAVLTTLLVSDVKLDDACQALAHVTPPPGRMQTLGGNVHPLVVVDYAHTPDALEKVLATLREIAGGGRLICVFGCGGNRDKGKRPLMGRATAKGADEVWVTSDNPRNEDPHQIIQDILAGMSGKPHIEPDRARAIFEAIGGAHQGDVVLIAGKGHEDYQEVAGERLPFSDVAVAKKALEAWA*