ggKbase home page

A1-16-all-fractions_k255_1145556_4

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: 6779..8233

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 435.0
  • Bit_score: 386
  • Evalue 4.00e-104
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 426.0
  • Bit_score: 370
  • Evalue 4.90e-100
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 435.0
  • Bit_score: 386
  • Evalue 5.60e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1455
ATGGACGCCGGACGGGAGTCGCTTGAGCGAGCCTACCGGGACGAGGCGACCCGGATCAGGGCCGCGCTGGCCGCGCGCACCGGCGATGTGGGGCTGGCGGAGGACGCGGTCCATGACGCGTTCATCGAGGCGATCGAGCACTGGCCGCGCGACGGTGTCCCCGCCAACCCAGGCGGCTGGCTGGCCACCACGGCCCGCCGCAAGGCACTGGACCGGCTGCGCCGCGACAAGACGGGCGCGGGCAAGCTGGCGCTGCTCGCCGCCACCGAGGCGTGGGCGGCGCCCGCCGCGCAAGCCGGTGCGCCGGGCGAGGCCATGGCAGACGAGCATGAGGCGTGGGTGCCTGGGGCATGTTCCGAGGAACCTGACGCCGCGGGAGCGGACAGGCAGGCCGACGACGAACTGCTCAGCCTGGCGTTCGCCTGCTGCCATCCGGCGCTGGCCCGTGACGCGCAGGTCGCCCTCACCCTGCGCGCCGTCTGCGGGCTGACCACCGAGCAAATCGCGGCGGCATTCCTGGTCAGCGAGCCAACGATGTCCCAGCGCATCCTGCGGGCGCGCAAGACGCTCAGCGGCCTGCGTACGCCGGTGACGATTCCCGACCCCGACGTGCTCGCGGACAGGCTCGCCCAGGTGCTCGCCGTCGTCTACCTCGTGTTCAACGAGGGCTACCTGGCGAGCTCAGGGCGTGAGCCGGCCCGCAGGGACCTCGCGGCTCAGGCGATCGCGCTGACCAGGACGCTGCACCGGCTCATGCCGCGCGAGCCGGAGGTGCTCGGACTGCTGGCGCTGCTCTTGCTGCACGAGTCGCGCGCCAGGGCGCGCTTCGACGGCTGGGGCCGCATCGTCCGCCTCAAGGATCAGGACCGGGACAAGTGGGACCGGCGGCTCGCCGACGAGGCGGGCCGCTACCTGGACCGCGCGATCGCGCTGCGCCGGGCAGGGCCCTACCAGGTCCAGGCGGCGATCGCCGCGCTGCACGCCCAGGCGCCGTCGTACGAGGAGACCGACTGGCGGCAGATCCGCCTGCTTTACAGCCGGCTGCAGCAGCTTGCCCCCTCGCCGGTGGTGCTGCTCAACCGCGCGGTCGCAACCCGTTACGCGATCGGCGCGGAGCAGGCGCTGGCCGAGGTCGAGCCGCTCGCCGCGGAGCTTGACGGCTATCACCTGTTCCACGCGCTTCGCGCTGCCTTGCTCGCCGAGGTGGGACGCGAAAAGGAGGCGGACCAAGTCCGCGAGCGATCGCTCGCGCTGGCGGCCAACCCGGCCGAGCGCGAGCTGCTCACCCGCGGGCTTTCGCTCTTATCTCCCGGGGACGCCCCCGTACCCCCGGTGTCCCCGCGTGGCGGCCCGATGGCAAGAAGCGCCATCGCAAGAGGGCCGCCACGCTGCGGCAAGAGCGGAGAGCTGCGCCGTAACCGAGCTCCTTTTACGAGGCTCAGCCCATCTCTATGA
PROTEIN sequence
Length: 485
MDAGRESLERAYRDEATRIRAALAARTGDVGLAEDAVHDAFIEAIEHWPRDGVPANPGGWLATTARRKALDRLRRDKTGAGKLALLAATEAWAAPAAQAGAPGEAMADEHEAWVPGACSEEPDAAGADRQADDELLSLAFACCHPALARDAQVALTLRAVCGLTTEQIAAAFLVSEPTMSQRILRARKTLSGLRTPVTIPDPDVLADRLAQVLAVVYLVFNEGYLASSGREPARRDLAAQAIALTRTLHRLMPREPEVLGLLALLLLHESRARARFDGWGRIVRLKDQDRDKWDRRLADEAGRYLDRAIALRRAGPYQVQAAIAALHAQAPSYEETDWRQIRLLYSRLQQLAPSPVVLLNRAVATRYAIGAEQALAEVEPLAAELDGYHLFHALRAALLAEVGREKEADQVRERSLALAANPAERELLTRGLSLLSPGDAPVPPVSPRGGPMARSAIARGPPRCGKSGELRRNRAPFTRLSPSL*