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A1-16-all-fractions_k255_3648131_2

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: 1703..2530

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J6I6_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 257.0
  • Bit_score: 213
  • Evalue 2.00e-52
sigma 28 subunit similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 257.0
  • Bit_score: 213
  • Evalue 5.70e-53
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:KDA41819.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 257.0
  • Bit_score: 213
  • Evalue 2.80e-52

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Taxonomy

Frankia sp. BMG5.23 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGACGACGAAGGCAACGTCCTCCGCGCCGATCCTCGGCTGCCAGGCCGAACTGGCCCAGCTGCCCGACGACGAGCTGCTGGTCCGATTCCGGGCGATGCCCCGTGACAGCCACGAGCGCTCCGTCGCGTGCGAGATCCTCGTCCAGCGCTACGAGCGCCTCGTCCGCTCGTGCGTGCGGCAGTACCGCGGCAGCCCAGAACCAGTCGAAGACCTGATGCAGGTGGGCTACGTCGGCCTGCTCAAGGCGATCAACAACTACGACCCCTCGTTCGGCAGCGGCCTGTCGGCCTACGCGGCCCCGTGCGTGAGCGGCGAGATCAAGCGGCATTTCCGCGACAAGCGCTGGCAGGTGCACGTCCGCCGTTCCGCACAGGAACTCCTGCTTGAGCTGCGCAAGGCGACCGAGGCGCTTACCCACTCGCTCGGCCGCACCCCCACCGACGAGGAGCTGGCGGAGCGGCTCGGCTGCAGCGCCGAGGACCTGCTCGAGGCCAGGCAGGCGGACATGGTGTTCAGCGCCTACTCGCTCGACGCGCCGCTGTCCGACAGGGACGACTCCGCGCAGCTCAGCGACGTGCTCGGGGACGATGACGCGGAGATGGAGCACGCGATCGACATGGAGTCCGTGTCGACGCACTGGGACGAGCTGCCCGAGCGGGAGCAGCGCATCCTCGTGATGCGGTTCTACGGCAACCTGACCCAGGCGGAGATCGGCGCCCGGCTCGGCATCTCCCAGATGCACGTGTCCCGGCTGCTGACCCGCGCGCTCAACCACCTGCGCAGCCGCCTGCTCGACAGCCCGGATGAGCTCGTGCGGAGCGCCTGA
PROTEIN sequence
Length: 276
MTTKATSSAPILGCQAELAQLPDDELLVRFRAMPRDSHERSVACEILVQRYERLVRSCVRQYRGSPEPVEDLMQVGYVGLLKAINNYDPSFGSGLSAYAAPCVSGEIKRHFRDKRWQVHVRRSAQELLLELRKATEALTHSLGRTPTDEELAERLGCSAEDLLEARQADMVFSAYSLDAPLSDRDDSAQLSDVLGDDDAEMEHAIDMESVSTHWDELPEREQRILVMRFYGNLTQAEIGARLGISQMHVSRLLTRALNHLRSRLLDSPDELVRSA*