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A1-16-all-fractions_k255_4125580_5

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(2917..3498)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKW9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 157
  • Evalue 9.20e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 157
  • Evalue 2.60e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA23962.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 157
  • Evalue 1.30e-35

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGTGACCGAAGCGGGCGGGACCGCGTTCGACGATGCGCTCGCCCGTGCGAGGCTGGGCGACGAAAATGGCTTCCTTGTGCTCTGGGAGGCCCTGCAGCCGCGGCTGCTGCGCTACCTGCAGGTCATCGGCTGCGATGACGTTGACGACGTGGCCGGGGAGACCTGGCTCCAGGTGGTGCGCGACCTGCCGAAGTTCAAGAAGGGCGGCGCGGATGAGTTCCGCGCCTGGATGTTCACCATCGGCAGGCACCGGGCCGTCGACGCGGCCAGGTCCCGCATTCGATTCCGGGACAAGGTACTGACCGCCGAGACAATGCCGCCGGCGGCAACGCCCGCTGGTTCAGTCGAGGATGAGGTGCTTCAGATGCTGTCTACCCGGCAGGCCATCGCCATGGTCGCCGGGCTGTCCAAGGACCAGGCCGAGGTGGTCGCACTGCGGGTGATCGCGGGGCTGGACACCGAGGCTGTCGCAAAGCTGCTGCGGAAGTCGCCAGGCGCGGTCCGCGTCGCCCTCCACCGTGGCCTGCGCGCCCTGTCCGACGATCCGCGCATTCACCTGATAGAGAGGGTGGACCAGTGA
PROTEIN sequence
Length: 194
MVTEAGGTAFDDALARARLGDENGFLVLWEALQPRLLRYLQVIGCDDVDDVAGETWLQVVRDLPKFKKGGADEFRAWMFTIGRHRAVDAARSRIRFRDKVLTAETMPPAATPAGSVEDEVLQMLSTRQAIAMVAGLSKDQAEVVALRVIAGLDTEAVAKLLRKSPGAVRVALHRGLRALSDDPRIHLIERVDQ*