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A1-16-all-fractions_k255_3942713_12

Organism: A1-16-all-fractions_metab_58

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 13 / 38 MC: 3
Location: comp(11748..12341)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SAE8_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 174.0
  • Bit_score: 114
  • Evalue 7.00e-23
Uncharacterized protein {ECO:0000313|EMBL:KIJ80739.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 6.70e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 174.0
  • Bit_score: 114
  • Evalue 2.00e-23

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Taxonomy

Scytonema tolypothrichoides → Scytonema → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACCGAAGGCCCGGGACCCGCTCCCGGCGAGATCGTGGCCGAGTCTCCTTCACCCGACGATAGGGCGCTGGCGCGGAACGCGCGAACAGACCGCGAGGCCTTCGCCCAGCTCTATCGCCGGCACGCCGACCGCGTCTATCGCTACCTGCTCGTGCGCCTCGCCGACGAGCATCTGGCGCAGGATGTCACCGCGCAGACGTTTCTCGTCGCGCTGGAGCAACTGGCGACCTATCGCGGCGAGGGCGAGTTCGTCTCCTGGCTGCTCGCCATCGCGCGGCACAAAGCCGCCGACGCGCTGCGCGGTCGCACGGCGACCCTGCCCCTGGAGGCCGCCGTCGATGTCGCGTCGCCGCAACCATCAGCCGATCAAGTCGTCGCCGCACGGCTGCGTCTGGACGAGGTCGCGCGGGCGCTGCGCTCCATCGCGCCGGAGCGGGCGGAGGCCCTGGCGCTGCGAGTCGTCGGCGGACTGAGCGCGGCGGAGGCAGGCATCGTGATGGGTAAGAGCGCGGCGGCGGTCAAGATGCTCGTCTCGCGCGCGGTCCACGATCTACGCGAGCGGCTGGCGTTCCTGGGGGAGGCGGAAGCATGA
PROTEIN sequence
Length: 198
MTEGPGPAPGEIVAESPSPDDRALARNARTDREAFAQLYRRHADRVYRYLLVRLADEHLAQDVTAQTFLVALEQLATYRGEGEFVSWLLAIARHKAADALRGRTATLPLEAAVDVASPQPSADQVVAARLRLDEVARALRSIAPERAEALALRVVGGLSAAEAGIVMGKSAAAVKMLVSRAVHDLRERLAFLGEAEA*