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A1-16-all-fractions_k255_467635_5

Organism: A1-16-all-fractions_metab_58

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 13 / 38 MC: 3
Location: 4329..5132

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7I1_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 160.0
  • Bit_score: 65
  • Evalue 8.60e-08
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:CCI53592.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 209.0
  • Bit_score: 66
  • Evalue 5.40e-08
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 160.0
  • Bit_score: 65
  • Evalue 2.40e-08

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Taxonomy

Tetrasphaera jenkinsii → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCCCACTGGCACAACCGATGGCCAGGGTCCGACTCAGGCCGACCGCGCCCGGCTGCGGCTGGCGCGCGAGATCGTCGCGTTGCCGCGCTGGGGGTCGCCCGCGCTCTGGAGCCGCCTGCGCTCGCACGATCCGCAGACCTCCGCCTCTTCCGGGGTGCTCGTGTCCTACCTGCGACTGGCGATGCGTCGCGGCGAGCAGCAGGCTGCACGCGAGTTATTCGTCCTGCTGCTTGGGCGCGTCGAGCGCATCAACCGCCAGTGGGCGCTGCAAGCCATCGCGCGCACGCCGTCATTGCGCGGCGAGTTCTCCGCCAGCGTGCGCGACGACCTCCTCCAGGAACTGGCGCTGCATCTGTGGGATGAGGTTGCGCTGCAGCGCGACGAGGCATGGGAGATCTATTTCACCCGCGCCCTCGGCTTCGCGCAGCGGCATGTCGCGACGGCGTTTATGGAACACAACGGCTACTGGATCGCGCCGGATGTGCGCGCGCCCTCGCGCGGAACGGCCATACCCTTCTCGCGGCTGGCGGCGCGCTGTGAGGCCGACGAGCGCGCGGGAGACGAGTGGCCGCAGTTGGCGGCGCCGGAGGATGGGATGGTCGCCGCGGAACTAGCCGACCTGCGCGAGTTGGTCGAGCGTTTGCCGAAGCGGCAGCGCGCGATCATCATCATGCGCTACTGGCAGGACGCGCGGGAGAGTGAGATCGCCGCGACGCTGGGCGTCACACCGCGGGCCGTACGCGCCATGCTGGCGCGCGCCTACACCCGTCTGCGCGCCGCCTACGAAGGCTCCGGCCAGTAA
PROTEIN sequence
Length: 268
MPTGTTDGQGPTQADRARLRLAREIVALPRWGSPALWSRLRSHDPQTSASSGVLVSYLRLAMRRGEQQAARELFVLLLGRVERINRQWALQAIARTPSLRGEFSASVRDDLLQELALHLWDEVALQRDEAWEIYFTRALGFAQRHVATAFMEHNGYWIAPDVRAPSRGTAIPFSRLAARCEADERAGDEWPQLAAPEDGMVAAELADLRELVERLPKRQRAIIIMRYWQDARESEIAATLGVTPRAVRAMLARAYTRLRAAYEGSGQ*