ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

A1-18-all-fractions_k255_3703896_2

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1337..2047)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter TonB n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4B021 similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 234.0
  • Bit_score: 157
  • Evalue 8.60e-36
Uncharacterized protein {ECO:0000313|EMBL:GAM00930.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 247.0
  • Bit_score: 151
  • Evalue 1.10e-33
TonB-like protein similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 238.0
  • Bit_score: 134
  • Evalue 2.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGTCCAGCTATCGCGGAACTGCAAACCAGCCTGACAGGGCGAAAGCAATTGGCGCCGTGGTGGTCGTCCACGTGATCCTCGCTTTCATCATCATTTCCGGGCTCGCGGTGCCGGTCGTGCGACACGCTGTCGATCAGATTACAACGATCAGACTGAGTGAGCTGCGACCGCCGCCACCCCCCGAGCAGCCTCCTAAGCCGCCACCGCGCCCCCACGCTGCAGCAAGGAAGCCGCAAGGAGCGCCCGCGAGCAAAGCCGAGGCTTCTGCCGTAGTTGCGCCGGAACCAAAGCTTCCGCTCCCCTCACCGATCGTTGCCGCCAAAGTCGCGGATACGGGAGCCGCCGCGATGTCAGGAGCCGCAGCTTCCGGAAAGGGAGCAGGGGCTGGCGGCAACGGGGCCGGCCCCGGTTCCGGAGGTGATTACACCGGCTACACGCCTGCCCGGCGCATATCCAAAATACCTGATCACGAGTATCGACAGCTCGCCTCTACGGGTTTGCAGAGCGGCAGCGTCGGAGTCACCGTCCGCGTCAATGTTGACGGGACCGTGTCAAACTGCCGCATCGCTCGCTCGAGCGGCAACGCAAGCGCCGACGCACTGATGTGCGACCTGACGCTGCGGTACATTCGGTTTGATCCTGCGCGTGACGCCTCCGGGCGCCCGGTAGCTCAGGACGTAACTATCGTTCCCAATTGGTGGCGACCTTAG
PROTEIN sequence
Length: 237
VSSYRGTANQPDRAKAIGAVVVVHVILAFIIISGLAVPVVRHAVDQITTIRLSELRPPPPPEQPPKPPPRPHAAARKPQGAPASKAEASAVVAPEPKLPLPSPIVAAKVADTGAAAMSGAAASGKGAGAGGNGAGPGSGGDYTGYTPARRISKIPDHEYRQLASTGLQSGSVGVTVRVNVDGTVSNCRIARSSGNASADALMCDLTLRYIRFDPARDASGRPVAQDVTIVPNWWRP*