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A2-16-all-fractions_k255_1584207_1

Organism: A2-16-all-fractions_metab_conc_14

partial RP 21 / 55 MC: 3 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2..193

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Caldimonas manganoxidans RepID=UPI00038256D7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 126
  • Evalue 5.70e-27
rpoD; RNA polymerase primary sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 126
  • Evalue 1.60e-27
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 126
  • Evalue 7.90e-27

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Taxonomy

Aquabacterium sp. NJ1 → Aquabacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ACCCCGCGCGAGGCCAAGGTGCTGCGCATGCGCTTCGGCATCGAGATGTCCACCGACCACACGCTGGAAGAAGTGGGCAAGCAGTTCGACGTCACGCGCGAACGCATCCGCCAGATCGAGGCCAAGGCCATCCGCAAGCTCAAGCACCCGAGCCGGTCGGACAAGCTGCGCACCTACCTGGACAACCTTTAA
PROTEIN sequence
Length: 64
TPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKAIRKLKHPSRSDKLRTYLDNL*