ggKbase home page

A2-16-all-fractions_k255_5619085_5

Organism: A2-16-all-fractions_metab_conc_14

partial RP 21 / 55 MC: 3 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2708..4666)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 634.0
  • Bit_score: 962
  • Evalue 1.90e-277
phosphomethylpyrimidine synthase n=1 Tax=Caldimonas manganoxidans RepID=UPI000360987B similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 632.0
  • Bit_score: 966
  • Evalue 1.30e-278
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 634.0
  • Bit_score: 962
  • Evalue 3.90e-278

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGACCTTGCCTCTCGCCCCGAATGCCCCGCACCCAGTGCCCGCCGCCGACGCGCCGGACGTTTCCGATTGCGGCCATGCCGCCTCCACCTCGCGCCAGCCGCTGCCCGCCTCGCGCAAGGTGCGCGTGCAAGGCATGCAATCCGGCGTCAGCGTGCCGATGCGCGAGATCGCGCTCACGAGCGGTGAGCACGTCACTGTCTACGACACCTCGGGCCCCTACACCGACCCGACCGCGCTGATCGACCTGCGGCGCGGCCTGGAGACCGTGCGCTCGCGCTGGATCGCAGCGCGCAACGACAGCGAGTCCTATGCCGGCCGCGCCGCGGTGCCGGTCGACGATGGCCAGCGCGCACGCTCGCCGTCGGCGGCCGAGGCGGCCGACCGCATCGCCTCGCTGCGCCGCGAGGCCGACGGCCTGCAGCGCACGCCGCGCCGCGCCATCCCCGGCCGCAACGTGACGCAGATGCACTACGCGCGGCGCGGCATCGTGACGCCCGAGATGGAGTTCGTCGCCCTGCGGGAGAACGGCCGCCACGAGTGGATGGCCGAGTACCAGGGCAACACCCAGCGCGAGCAGCGCCTGCGCGGCGACGCGCGCGGCGCCGCGATCCCGGCGCGCATCACGCCGGAGTTCGTGCGCGACGAAGTGGCGCGCGGCCGCGCGATCATTCCGGCCAACATCAACCACCCCGAGCTCGAGCCGATGGCCATCGGGCGCAACTTCCTGGTCAAGGTCAACGCCAACATCGGCAACTCCGCGACCACCTCCAGCATCGAGGAGGAGGTCGACAAGCTTGTCTGGGCCACGCGCTGGGGCGCCGACACGGTGATGGATCTTTCCACCGGCGCCAACATCCACACCACCCGCGACTGGATCCTGCGCAACAGCCCGGTGCCCATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTGGGCGGCATCGCCGAGGAACTCAGCTGGCCGCTGTTTCGCGACACGCTGATCGAGCAGGCGGAGCAAGGCGTCGACTACTTCACCATCCACGCGGGCGTGCTGCGCGAGTTCGTGTCGCTGACGGCCGGTCGCCGCACCGGCATCGTCTCGCGCGGCGGCGCGATCCTCGCCAAGTGGTGCATGGCGCACGGCTGCCAGAACTTCCTGTTCACGCACTTCGAGGAGATCTGCGAGATCATGAAGATCTACGACGTCTCGTTCTCGCTGGGCGACGGGCTGCGCCCCGGCTCGCTGGCCGATGCCAACGACGAGGCGCAGATGGCCGAGCTGCGCACGCTGGGCGAGCTCACCAAGGTGGCATGGAAGCACGACGTGCAGACCATGATCGAGGGTCCGGGCCACGTGCCCATGCACCTGATCCAGGCCAACATGGACGAGCAGCTGCGCCTGTGCGGCGAGGCGCCCTTCTACACGCTGGGGCCGCTGACGATCGACATCTCGCCCGGCTACGACCACATCGCCAGCGCGATCGGCGCCGCGATGATCGGCTGGATGGGCACCGCGATGCTGTGCTACGTGACGCCCAAGGAACACCTGGGCCTGCCCGATCGCGACGACGTCAAGCAAGGCCTGATCGCCTACAAGATCGCCGCGCACGCCGCCGACGTCGCCAAGGGCCACCCAGGCGCCCGCGCGCGTGACGACGCGATGAGCAAGGCACGCTTCGAGTTCCGCTGGCACGACCAGTTCAACCTGGCGCTGGACCCCGACACCGCGCGCAGGTACCACGATGAGACGCTGCCCGCCGAGGCCGCCAAGGAGGCGCACTTCTGCAGCATGTGCGGTCCGAAGTTCTGCTCGATGAAGACCTCGCAGGAGGTGCGCGAATTCGCGGCCGCGCAGGCCCACGCCACGCTGGCCGACGCCGATTCGGCGGCGCGGACCGGAGCTGCCAACCTGAAGCGCCGCACATTGCAGGGCAAGCCCTTCGTGCCGATCTACGACGCGGAGGGTGAATGA
PROTEIN sequence
Length: 653
MTLPLAPNAPHPVPAADAPDVSDCGHAASTSRQPLPASRKVRVQGMQSGVSVPMREIALTSGEHVTVYDTSGPYTDPTALIDLRRGLETVRSRWIAARNDSESYAGRAAVPVDDGQRARSPSAAEAADRIASLRREADGLQRTPRRAIPGRNVTQMHYARRGIVTPEMEFVALRENGRHEWMAEYQGNTQREQRLRGDARGAAIPARITPEFVRDEVARGRAIIPANINHPELEPMAIGRNFLVKVNANIGNSATTSSIEEEVDKLVWATRWGADTVMDLSTGANIHTTRDWILRNSPVPIGTVPIYQALEKVGGIAEELSWPLFRDTLIEQAEQGVDYFTIHAGVLREFVSLTAGRRTGIVSRGGAILAKWCMAHGCQNFLFTHFEEICEIMKIYDVSFSLGDGLRPGSLADANDEAQMAELRTLGELTKVAWKHDVQTMIEGPGHVPMHLIQANMDEQLRLCGEAPFYTLGPLTIDISPGYDHIASAIGAAMIGWMGTAMLCYVTPKEHLGLPDRDDVKQGLIAYKIAAHAADVAKGHPGARARDDAMSKARFEFRWHDQFNLALDPDTARRYHDETLPAEAAKEAHFCSMCGPKFCSMKTSQEVREFAAAQAHATLADADSAARTGAANLKRRTLQGKPFVPIYDAEGE*