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A3-16-all-fractions_k255_2371089_2

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(162..1136)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MW17_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 322.0
  • Bit_score: 319
  • Evalue 3.10e-84
RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 325.0
  • Bit_score: 307
  • Evalue 4.40e-81
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU75230.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 325.0
  • Bit_score: 307
  • Evalue 2.20e-80

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGCAATCGGTTGAGCAGGAGTTCGCATCGCGGAGCGACCCGTTCCGCCGGGAGCTGCTCGCCCACTGCTACCGGATGCTCGGCTCGTTTCAGGACGCGGAGGACGCCCTGCAGGACACCTACCTGCGGGCCTGGCGCGGGTACGCCGGCTTCGAGGGGCGCTCGTCCATGCGCACGTGGCTGTACCGCATCGCGACCAACACCTGCCTGACCGCACTCGAGCGCTCCGGCCGCGCCCGCGTGCTGCCCTCGGGCCTGGGCGGGGCGAGCACAGCCGGCCCGCACCAGCTGGCCGAGCGGGCGGAGGAGGTGCCGTGGCTCGGGCCGCTGCCGGACTCCGCGGTGCAGGGCGACGCCGACGACCCGGCGGTGGTCGCGACCCGCCGGGAGACGACCCGGCTGGCCTTCGTCGCCGCCTTGCAGCTGTTGCCGGCCCGGCAGCGGGCGGCGTTGCTGCTGCGGGACGTGCTCGACCTGTCGGCCGCCGAGACGGCCGAGGTGCTGGAGATGACGGTGCCGGCGGTCAACAGCGCCCTGCAACGCGCCCGCGCCCAGCTGGCCGGACGACCGGCCCGGGCAGAGGAGACGGCGATGGTTTCGGACGTGGACCGGCGGGTGCTCGAGCAGTACGTGACCGCGTTCGCGAACTCCGACCTGGAGCTCCTGACCGGGCTGCTGCGCCGGGACGTGCAGCTCGAGATGCCGCCCGTCCCGACCTGGTTCAGCGGCTTCGACGACGTGCTGCGGTTCTTCGCCGAGCGGGTGATGACCGGGCGGGTCCGCCGGTTCGTGCCGGTCGGCGCCAACGGCTGCCCAGGAGTGGCCGCGTACGTCCTCGAAGAGGACGGACGGCAGCACGCGCACAGCATCCAGGTGCTCGAGATCGAGGACGGGCGGATCCGGCACGTCTACGTCTTCCTCGACCGCACGCTGTTCCCCGGCTTCGGCCTGCCGGAGATCCTCGACGGAGAATGA
PROTEIN sequence
Length: 325
MQSVEQEFASRSDPFRRELLAHCYRMLGSFQDAEDALQDTYLRAWRGYAGFEGRSSMRTWLYRIATNTCLTALERSGRARVLPSGLGGASTAGPHQLAERAEEVPWLGPLPDSAVQGDADDPAVVATRRETTRLAFVAALQLLPARQRAALLLRDVLDLSAAETAEVLEMTVPAVNSALQRARAQLAGRPARAEETAMVSDVDRRVLEQYVTAFANSDLELLTGLLRRDVQLEMPPVPTWFSGFDDVLRFFAERVMTGRVRRFVPVGANGCPGVAAYVLEEDGRQHAHSIQVLEIEDGRIRHVYVFLDRTLFPGFGLPEILDGE*