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A3-16-all-fractions_k255_2920105_5

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(2000..2731)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Mycobacterium avium 10-5581 RepID=V7J364_MYCAV similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 210.0
  • Bit_score: 242
  • Evalue 3.60e-61
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EUA15639.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 210.0
  • Bit_score: 242
  • Evalue 5.00e-61
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 210.0
  • Bit_score: 240
  • Evalue 5.00e-61

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Taxonomy

Mycobacterium kansasii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGACGGTGTCGGACGACGAACTGGTTCAGGCGCTGCGGGCCGGCGACGAGCGCGCGTTTGCCGAGCTCGTCGACCGGCACAGCCCGGCAATGCTCGCGGTCGCGCGAAGGTACGTCGCGTCGCGGGAAGTGGCTGAGGACGTCGTGCAAGACACCTGGCTGGCCTTGCTCAAGGGCATCGACGGTTTCGAGGGTCGATCGAGCATGCGCACGTGGCTGTTCCGGGTGCTGGTCAACATCGCCAGGTCCCGCGGCGTTCGCGAGAAGCGGACCACTCCCGTCGCCATGGATGGGGACGACAGGCGGCCAACCGTCGGGCCCGAACGATTCCAGTCGGCGGCTGATCGCCGGCCCGGTCACTGGGTCCGATTTCCAACGCCGTGGCCCGGATCGCCGGAAGACTGCCTGCTCGCCGGCGAGGCGCGGGAGCTGGTGCGTCGCGAGCTGGCCCGGCTTCCCGAGCAGCAGCGCATCGTCGTGTCGCTGCGCGACGTCGACGGCTATGACTCGGGCGAGGTGTGCGCCGTGCTCGAGCTGACGGCGGCGAACCAGCGCGTGCTGCTTCATCGAGGGCGAGCCCGGATCCGTGAGGCGCTGGCCGGTTACTTCGAGGCGGGCCGGCCCGGCATCCCACGACCGGGCTACGTTGGGGACGTGATCGTCGCCGAGTCGGTCATCACCAGGCAGGTCGAAGCGGAGAATCATCGGCATGACCAAGCTGACTGCGGTTGA
PROTEIN sequence
Length: 244
VTVSDDELVQALRAGDERAFAELVDRHSPAMLAVARRYVASREVAEDVVQDTWLALLKGIDGFEGRSSMRTWLFRVLVNIARSRGVREKRTTPVAMDGDDRRPTVGPERFQSAADRRPGHWVRFPTPWPGSPEDCLLAGEARELVRRELARLPEQQRIVVSLRDVDGYDSGEVCAVLELTAANQRVLLHRGRARIREALAGYFEAGRPGIPRPGYVGDVIVAESVITRQVEAENHRHDQADCG*