ggKbase home page

A3-16-all-fractions_k255_411922_13

Organism: A3-16-all-fractions_metab_conc_44

partial RP 34 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 12887..13798

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PDW5_STRVR similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 303.0
  • Bit_score: 321
  • Evalue 7.50e-85
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ELS54288.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 303.0
  • Bit_score: 321
  • Evalue 1.10e-84
sig11; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 300.0
  • Bit_score: 320
  • Evalue 2.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces viridochromogenes → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGACAGAGGTCTACGAAGAGCTCAGACCGCTCCTCTTCTCAATCGCCTACCGCATGCTCGGTAGCGCCAGCGAGGCCGAGGACATCGTGCAGGAGGCGTTCCTGCGCTTCCACCAGGCCGAGAAGGAGGAGAAGATCGACAACGTGAAGGCGTTCCTGTCGACGATCACCACGCGCCTCGCCATCGACCAGCTGCGCTCAGCCCGCGTGCGGCGCGAGAGCTACGTCGGTCCCTGGCTGCCCGAGCCACTGCTCACCGAGACGGTGCCGGACGCTTCGCAGCACGCAGAGACCGCCGACTCGCTGTCGATGGCGTTCCTCGTGATGCTCGAGAGCCTCTCGCCCGTTGAACGCGCGGTGTTCCTCTTGCGCGAGGTGTTCGACTATCCGTACGACGAGATCGCAGGCGTGATCGGCAAGTCGGAGGACAACACGCGCCAGCTGGCGGTCCGCGCGCGGCGGCACGTCGATGAACGGCGCCCGCGCTTCGAGGCCGACAAGAAGGCGCGCGAGGAGCTCGCGGGGCGCTTCTTCGCCGCCGCCGAGGAAGGCGACACCGAGGGCCTGCTGAAGCTCCTCGCGGACGACGTGGTGTTCTACGGCGACGGCGGCGGCAAGGGCCCGGCGATTCAGAAGCCGCTCTACGGCCGCCAGAAGGTCAGCCGCTTCCTGGAGGGGCTGTTCCGGCAGGCGAACCGCCTGGAGTTCACCCTGGTGCCAACCGAGGTGAACGGCGAGCCCGGCGCGGTGGCGCGCTACAAGGACGGCCGGGTGGCGAGCGTGTTCTCGATGCAGATCGCCGGCGGCCAGATCGTCTCGATGCGCTCAGTGGTGAACCCGGACAAGCTCGCCCACATCGGTCCGGTGGTGAACCTGTACGAGGTGCTGAACGCTCGCCGAGAACGCGCTTAG
PROTEIN sequence
Length: 304
MTEVYEELRPLLFSIAYRMLGSASEAEDIVQEAFLRFHQAEKEEKIDNVKAFLSTITTRLAIDQLRSARVRRESYVGPWLPEPLLTETVPDASQHAETADSLSMAFLVMLESLSPVERAVFLLREVFDYPYDEIAGVIGKSEDNTRQLAVRARRHVDERRPRFEADKKAREELAGRFFAAAEEGDTEGLLKLLADDVVFYGDGGGKGPAIQKPLYGRQKVSRFLEGLFRQANRLEFTLVPTEVNGEPGAVARYKDGRVASVFSMQIAGGQIVSMRSVVNPDKLAHIGPVVNLYEVLNARRERA*