ggKbase home page

A3-16-all-fractions_k255_7139095_3

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: comp(1929..2978)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, TIGR02960 family n=1 Tax=Acidovorax sp. CF316 RepID=J0UF89_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 334.0
  • Bit_score: 407
  • Evalue 7.00e-111
RNA polymerase sigma-70 factor, TIGR02960 family {ECO:0000313|EMBL:EJE54822.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 334.0
  • Bit_score: 407
  • Evalue 9.90e-111
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 312.0
  • Bit_score: 359
  • Evalue 1.10e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAAATCAATGGGCGCTGAGTCGTTTCCCGAAGCCGACCTGATCGTCCGTGGGAAGGCGGGCGATTCTTCCGCCTTCGACCGGCTGGCCGCGCGGCACCGTCGCGCGTTGGGCGCCCACTGCTATCGCATGCTCGGTTCGCCCCATGACGCCGACGACGCGCTCCAGGAATCGCTGATCGCGGCCTGGAAAGGTCTGCCATCGTTCGAGGCCCGCAGCAGCCTGAAGACCTGGCTGTACCAGGTCACCACGCACGTCTGCCTGCGCATGATTGCCAAGCGGCCTCGGCGCGCGATGTCGCCCGAGGCGGCGCCGCCGCTCGCGGACCCGTCCGAGCTCGGACAACCGGTCATGGAGCCGATCTGGCTGGAGCCGCTTCTCGACGACGACGCGTTGAGCGACGCAACGGCGGCCGACGAGCCCGTCGCTGCGTTCCAGCGGCGCGAGAACGTGGCACTGGCGTTCGTGGCGGCGCTGCAGCACCTGCCGGGCACGCAACGCGCCGTGCTGCTGCTGCGCGAGGTTCTCGAATACTCGGCGGCCGAGACGGCGGAGACCTTAAACACCTCCGTGGCCTCGGTCAACAGCGCGTTGCAGCGCGCCCAGAAGACCGTCAAGGAGAAGATGCCCGCGATCTCGCAACAGGCGGAGCAGCGGGCGCTGGGCGATGCCGGACTGCGGCGGCTGCTGGGCGCCTTCGTGACGGCCTGGGAAGCCCGCAACGTGGGCGACCTGGTGGCCTTGCTGACCGAGGACGCCCAGTTCACCATGCCGCCGCTGCTGACCTGGTTCGACGGCCGCGCCGCCGTGGAGCGCTTCATCGCGGATCGGCTGTTCGCCACGCCCTGGCGCCTTGTGCCAATGCGCGCCAACGGCCAGCCGGGCTTTGCCTGCTACATCCGCATGGCCGGCCAGAGCGACTACCGGTTGGGCGCGATCAACCTGCTGAGCCTGCGCGGCGGACGGATCTCTGCCATCAACAGCTTCCTCGACCCGGCGCTGCACGGTCGGCTCGGTCTGCCGGCCGAGCTTCCGCCAGAGTTTTCTTGA
PROTEIN sequence
Length: 350
MKSMGAESFPEADLIVRGKAGDSSAFDRLAARHRRALGAHCYRMLGSPHDADDALQESLIAAWKGLPSFEARSSLKTWLYQVTTHVCLRMIAKRPRRAMSPEAAPPLADPSELGQPVMEPIWLEPLLDDDALSDATAADEPVAAFQRRENVALAFVAALQHLPGTQRAVLLLREVLEYSAAETAETLNTSVASVNSALQRAQKTVKEKMPAISQQAEQRALGDAGLRRLLGAFVTAWEARNVGDLVALLTEDAQFTMPPLLTWFDGRAAVERFIADRLFATPWRLVPMRANGQPGFACYIRMAGQSDYRLGAINLLSLRGGRISAINSFLDPALHGRLGLPAELPPEFS*