ggKbase home page

A3-16-all-fractions_k255_5195766_3

Organism: A3-16-all-fractions_maxb_87

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: comp(2045..2755)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:EEF57413.1}; EC=4.2.99.18 {ECO:0000313|EMBL:EEF57413.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 221.0
  • Bit_score: 262
  • Evalue 3.50e-67
Endonuclease III n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 221.0
  • Bit_score: 262
  • Evalue 2.50e-67
nth1a; base excision DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 220.0
  • Bit_score: 251
  • Evalue 2.10e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 711
CTCTTTGCGGCAGGCACACTCCTTGTAGGTCAACGCTCAGTGCAAGACTCAAAGCTTCCATTTGATATCGTCGAAGTCATGAAGCGATTGCGGCGAGCGGTTGCGAAGTTTGAAAAGGCCACCATGCACGTTCTGGCTGACGATGGCTTCTCATCGGTCTTTGAACAGATCATTGCTTGCATGATCTCCATTCGGACGCGGGAAGAGACGACTGATGTCGTGGCGCGAAGGTTTTTCAGCAAAGCTCGCACACCGAAGGAAGTCTCGAGACTTCCACTTTCCGAACTTCAGAAGCTTCTTCATGGCTCGACTTTCTCCGAGGCCAAAGCAAGATCCATTCGTGAGATCGCCTTGCAGGCACAAGAGAAGTATCCCAAAGGCATCCCATGCGATCGCGAGGTTCTTCTCTCTTTCAAAGGAATCGGACCTAAATGCGCCAATCTGGTTCTCTCGGTTTCCTGTCAGGAGAAAAGAATCGGCGTGGATATTCATGTTCATCGGGTCACCAACCGATGGGGGTACGTCTCGGCCTCGACTCCTGAAAAAACACTGCTGGCGCTGGAAGAAAAACTTCCGCGCAAATACTGGAGCGAGCTCAATCCGCTGCTTGTGCCATTTGGAAGAAACATCTGCACCGGTACGAGGCCAAAATGCTCGGAGTGCCTGCTTCTGCCTTATTGCCGGCAAGTGGGCGTGAAGTCCCACCGGTGA
PROTEIN sequence
Length: 237
LFAAGTLLVGQRSVQDSKLPFDIVEVMKRLRRAVAKFEKATMHVLADDGFSSVFEQIIACMISIRTREETTDVVARRFFSKARTPKEVSRLPLSELQKLLHGSTFSEAKARSIREIALQAQEKYPKGIPCDREVLLSFKGIGPKCANLVLSVSCQEKRIGVDIHVHRVTNRWGYVSASTPEKTLLALEEKLPRKYWSELNPLLVPFGRNICTGTRPKCSECLLLPYCRQVGVKSHR*