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H1-16-all-fractions_k255_61971_3

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: 1119..2054

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 312.0
  • Bit_score: 431
  • Evalue 9.70e-118
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 309.0
  • Bit_score: 430
  • Evalue 3.30e-118
DNA-directed RNA polymerase subunit alpha n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z262_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 312.0
  • Bit_score: 431
  • Evalue 6.90e-118

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCTGATCATCCAGCGTCCCGAAGTCGAAGCCGGCGACCCCGAGGGGAACGTCCAGACGTTCACGCTCTCGCCGCTCGAGCCCGGCTTCGGCCACACCCTGGGCAACTGCCTTCGCCGCACGCTGCTCTCGTCGATCCCCGGCGCCGCCGTGAGCCAGGTCCGCTTCGACGAGGCGCTGCACGAGTTCGACGTGATCCCCGGGGTCAAGGAGGACGTCACCGACCTCATCCTGAACCTCAAGGACCTCGTGCTCCGGTGCGAGTCGGAGGAGCCCGTCACGCTGCGGATCGACAAGCGCGGGCCCGGCGACGTCACCGCCGCCGACATCCAGACCACAGCGGACGTCGAGGTGCTCAACGGCGAGCTGCACCTCGCGACCGTGAACCAGCGGGGCCGGCTCGCGCTGGACCTCACCGTCGAGCAGGGCCGGGGCTACCTGTCGGCCGAGCGCAACAAGCGCACGTCCACGATCGGCGTGATCCCCGTCGACGCGATCTTCTCGCCGGTGCGGCGGGTGGCGTTCTCGGTCGAGCCGACACGAGTCGAGCAGGCAACCAACTACGACAAGCTCAGCCTCGAGGTCGAAACCGACGGATCGATCTCGCCCCGCGATGCACTGGCATCGGCGGGTGAGACGCTGCGCAACCTGGTCAGCCTGGTCGCCGACCTCTCGTCGGAGCCGAAGGGCCTCGAGCTCGGTGAGGTGTCGCCGATCACGGCGGCGTCGCCCGACCTCGAGCTGCCGATCGAGGAGCTCGACCTGTCGGAGCGGCCCCGCAACTGCCTGAAGCGGGCCCGCGTCGACACGATCGGCCAGCTGGTCCAGAAGTCCGAGGACGATCTGCTCGCCATCACGAACTTCGGTTCGAAGTCGCTCGAAGAGGTGCTGCAGAAGCTCGACGAGCGCGGCCTCTCTCTGCGCGTGAAGGAGTAG
PROTEIN sequence
Length: 312
MLIIQRPEVEAGDPEGNVQTFTLSPLEPGFGHTLGNCLRRTLLSSIPGAAVSQVRFDEALHEFDVIPGVKEDVTDLILNLKDLVLRCESEEPVTLRIDKRGPGDVTAADIQTTADVEVLNGELHLATVNQRGRLALDLTVEQGRGYLSAERNKRTSTIGVIPVDAIFSPVRRVAFSVEPTRVEQATNYDKLSLEVETDGSISPRDALASAGETLRNLVSLVADLSSEPKGLELGEVSPITAASPDLELPIEELDLSERPRNCLKRARVDTIGQLVQKSEDDLLAITNFGSKSLEEVLQKLDERGLSLRVKE*