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H1-18-all-fractions_k255_2378198_7

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(4695..5177)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037F0394 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 159.0
  • Bit_score: 233
  • Evalue 8.40e-59
RNA polymerase ECF sigma factor {ECO:0000313|EMBL:CEL16138.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 159.0
  • Bit_score: 243
  • Evalue 1.50e-61
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 159.0
  • Bit_score: 233
  • Evalue 2.40e-59

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GTGGAGGACTTCGCCGAGTTCGTGAAGGAGGCATTGCCGGGGTTGCTGAGGTACGGGCACATGCTGACGGGCAACCCGCACGACGCGGCGGATCTTGTCCAGACCGTGCTCGAGCGGGTGGGGGCACGGTGGCAGACGATCGCGCGCAAGACCGGGGACCCCGTCGCCTATGCGCGGAAGGCCATGGTGAACACGCACGTCAGCCGGTGGCGGCGGGCGAAGAGGGAGAGCCTCCTCGCCGACCTCCCCGACACACCCGACGTCCCCCGCGACGACCCGTTCGAGAACGAGCCGTTGTGGGAGGCGCTGCGTGGGCTGCCACCGCGCCAGCGTGCGGTGATGGTCCTGCGTTACTACGAGGAGATGTCCGAGGCGGAGATCGCGGCTGTCCTGGGGGTCAGCCGCGGCACCGTCAAGAGCCAGGCCAGCAAGGCGATGACGACCTTGCGGGGCAGGCTCGGCGCGTCGGTGGGAGGTGCCTGA
PROTEIN sequence
Length: 161
VEDFAEFVKEALPGLLRYGHMLTGNPHDAADLVQTVLERVGARWQTIARKTGDPVAYARKAMVNTHVSRWRRAKRESLLADLPDTPDVPRDDPFENEPLWEALRGLPPRQRAVMVLRYYEEMSEAEIAAVLGVSRGTVKSQASKAMTTLRGRLGASVGGA*