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H1-18-all-fractions_k255_6049394_11

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(11692..13422)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IXQ6_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 533.0
  • Bit_score: 504
  • Evalue 1.20e-139
Putative WD-40 repeat protein {ECO:0000313|EMBL:EME55844.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 579.0
  • Bit_score: 453
  • Evalue 3.40e-124
Transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 545.0
  • Bit_score: 423
  • Evalue 5.80e-116

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Taxonomy

Amycolatopsis decaplanina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGGGAGACCAGAGCGCCCGCTTGACCCGGAAGCGGGTTCGGTGCAGCGGTTCGCGTGGGAGTTGCGCCGGCTGCGGGAGAAGACCGGCTCACCGAGCTACCGACAGCTGTCCCGGCGCGCGCATTTCTCGCCGACCGCGTTGTCGGAAGCGGCCGGGGGCGAGCAGTTCCCGTCGCGGGCCGTCGCCCTGGCCTACGTCAGGGCCTGCGACGGGGACGTGGCGGCATGGGAGGACCGGTGGCGCGCCGTCGCCGCCGAGGTGGCCCCCGGACGCGTCGGCACCGACACCCCGCCGTACCCGGGGTTGGCGGCCTTCCAGCCCGAGGACGCGGCGCGGTTCTTCGGGCGGGAGGCGCTCGTCGCCGAGCTGGTGGACCGCGTGAGCAAGCAGTGGGTCGTGGGCGTGTTCGGGCCGTCGGGGGGCGGCAGGTCGTCGTTGCTGCGTGCCGGGTTGGTGTCGGCCGCGCCGTGGCGGTCGGTGCTGCTGACCCCCACCGCGTTCCCGGCGCGGGAGTGGGCGGAGCGGGTCGTGGACGAGGTCGAGCTGGTGGTGGTGGACCAGTTCGAGGAGGTCTTCACGCTGTGCGTGGACCAGGCCGAGCGGGAGCGGTTCGCGGCCGCCCTGACGGGGTCCGGGAAACGGGTGGTGTTCGCCTGCCGCGCCGACTTCCGCGACCGCTGCGCGCGGCTGCCGGGCCTGGCCGCGGTGCTGCGTGCCGGACAGGTGCGCGTCGAGCCGATGAACGGCGAGGACCTGCGCCGCGTGATCGAGGAGCCGGCGAGGCGGCACGGCCTGCGGGTGGACCCCGACCTGGTGTCGGTGGCGCTGACCGAGGTGCCCGGGCAGGCGGGTGCGTTGTCGTTGCTGTCACACGCGTTGCTGGAGACGTGGCGACGGCGGGAGAACGGCCGGCTGACGCTCGACGGGTACCGCGCCGCCGGCGGCCTGGCCGGCCCCATCGCCACGATGGCCGAACGCGCCTTCACCGCGCTGGCACCCCGCGCTCAGGTGGTGGCCCGCGGCGTGCTGCTGCGGCTGGTGTCCGGCGAGCACGACCCGCGCCGGCGCGCCCCACTGGCCGAGGTGCTGGCCGCGGGCGAGGAAACCGAGACCGCGGCGGTGGTCGAGGCGCTGACCGCCGCCCGGGTCGTGGTGGTCGCCGAGTCGACCGTGGAACTGGCGCACGCGTCGCTGAGCACCGCCTGGCCGCGCCTGCGGGAGTGGGTCACCGCGGACCGCGAGAGCCTGCGCGTCCACCGCGACCTCACCGCTGCCGCCCTGGTGTGGGAGTCCCACGACCGGGACCCCGGCGCCCTGTACCGCGGGGTCCGCCTCGCGGCGGCCACGGCACTCGCCGAGCATCCCGACTGGCCGCTGCTGTCGACACCGGCGGAACGCGAGTTCCTCGGTGCCAGCTCCGAGCAGGAGCGCGGGACCGGACGCCAGCGCACCCGCCAGCTCATCCAGGCGCTCGGCATGCTGCTGGTGGCAGGCCTCGTCCTCGTCGCGGTGGCCACGCACTGGGTCACGTTCGGCGGCGGGCAACCTGCCGCACCGCCACAGAAATGCCAGGTGGTCTGGCCGACCAGCCACGACTCGGCCTGCCGGGTGCCGCTGACCGGCTCCGTGACGGCGCGTGTCAGCTCTTCCGCCGCGCAGGGTTTCCACGCGGAGACAGTCGAATTCTCGGCGACAGGCGGTGGCGAGACGACCCGGGTCCAGAACTAG
PROTEIN sequence
Length: 577
MGRPERPLDPEAGSVQRFAWELRRLREKTGSPSYRQLSRRAHFSPTALSEAAGGEQFPSRAVALAYVRACDGDVAAWEDRWRAVAAEVAPGRVGTDTPPYPGLAAFQPEDAARFFGREALVAELVDRVSKQWVVGVFGPSGGGRSSLLRAGLVSAAPWRSVLLTPTAFPAREWAERVVDEVELVVVDQFEEVFTLCVDQAERERFAAALTGSGKRVVFACRADFRDRCARLPGLAAVLRAGQVRVEPMNGEDLRRVIEEPARRHGLRVDPDLVSVALTEVPGQAGALSLLSHALLETWRRRENGRLTLDGYRAAGGLAGPIATMAERAFTALAPRAQVVARGVLLRLVSGEHDPRRRAPLAEVLAAGEETETAAVVEALTAARVVVVAESTVELAHASLSTAWPRLREWVTADRESLRVHRDLTAAALVWESHDRDPGALYRGVRLAAATALAEHPDWPLLSTPAEREFLGASSEQERGTGRQRTRQLIQALGMLLVAGLVLVAVATHWVTFGGGQPAAPPQKCQVVWPTSHDSACRVPLTGSVTARVSSSAAQGFHAETVEFSATGGGETTRVQN*