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H1-18-all-fractions_k255_2841424_4

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2892..4157)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W4N5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 291.0
  • Bit_score: 441
  • Evalue 5.30e-121
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 302.0
  • Bit_score: 545
  • Evalue 9.70e-153
RNA polymerase sigma24 factor {ECO:0000313|EMBL:AJK53239.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 302.0
  • Bit_score: 545
  • Evalue 4.80e-152

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Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGACCGCCGGAGAACGCGGCGGGCACGCTCGTCTCGGAGGCGGCACGCGGCTGCGCAACGCGCTCGGCGAGCAGTTCATGGCCCGGTACGACCCCGACCAGACGGGACTGTCCACCCGCGACAGAGTGGCGCTGGCGGCGTACACCGAGATCAAGAAGGGACGCCGGCCGGCGGCGTGTGGCTCGACGTCTCGAGGGAGGCGACGGAGGAAGCCCCGGCGCGAGATCGACGAGCTGCTGGCCGCCGACGGCCCGGAGAACGTGCTCGCCCGGCAGCGCTGCCGGGACCCGCCGAGGTCCGACCTCGTAAAGTGGTGGAGGTCGGGCGGCGCTCGCGAGACGACGATGGGGCGTGGGGTGGCGGATTCCGGGGTGAGTGCCGAACTCGGCGGCGCGGACGATCTCGAGGCGGCCGCGGCTGTGTTCACGCAGGTGCGGCCGCGCCTGTTCGGGATCGCGTATCGCATGCTCAGCAGCGTCAGTGAGGCCGAAGACCTGGTGCAGGAGGTCTGGCTGCGGTGGCAGACCTATGACCGTGCCACGGTGGCCAACCCGGAGGCCTTCCTGGCGACGACCACCACCCGGCTGGCCATCAACGTCCTCCAGTCGGCCCGGAAACGGCGTGAGACCTACATCGGGCCGTGGCTGCCCGAACCGGTCGACACCGGCGCGGACCCGTACCTGGGCGCCGAGCGCGGTGAGGCCCTGGAGTTCGCGGCCCTGCTGCTGATGGAGAAGCTCACCCCGAACGAACGCGCCGCCTACGTGCTGCGGGAAGCCTTCGACTACTCCTACGCGCAGATCGCGGACATCCTGTCCTCGGCCGAACCCGCGGTGCGTCAGCTGGTCAGCCGGGCCCGCAAGCACATCGCGGGCGAACGGCGCGCACCGGTGACCGCGGCCGAGCAGCGCGAGCTGCTGACCACGTTCCTCACCGCCGCCCGCTCGGGCGACCTGACCGCGCTGGAACGGCTCTTCACGCCGGACGTGACCAGCCTGTCCGACGGCAACGGCCGGAAGGGCGTCGCCCGCACGCCGGTCGTGGGTGCGGCGCGGGTGGCGAAGTTCCTGCGGGCGATCTCCACCTGGTTCTGGGACGACGTCGACGTGCGGTGGGCGATCACTAACGGGCAGACTTCCGCCGTACTCCTCCGCGACGGCGCCGTGTACGGCCTGCTCACCGTCAGCGCCACCACCGAAGGCATCGACAAGGTGCTGTGGCTGGTCAACCCCGAGAAGAACAAAGCGGTGTCCGTCGCGGGCTGA
PROTEIN sequence
Length: 422
MTAGERGGHARLGGGTRLRNALGEQFMARYDPDQTGLSTRDRVALAAYTEIKKGRRPAACGSTSRGRRRRKPRREIDELLAADGPENVLARQRCRDPPRSDLVKWWRSGGARETTMGRGVADSGVSAELGGADDLEAAAAVFTQVRPRLFGIAYRMLSSVSEAEDLVQEVWLRWQTYDRATVANPEAFLATTTTRLAINVLQSARKRRETYIGPWLPEPVDTGADPYLGAERGEALEFAALLLMEKLTPNERAAYVLREAFDYSYAQIADILSSAEPAVRQLVSRARKHIAGERRAPVTAAEQRELLTTFLTAARSGDLTALERLFTPDVTSLSDGNGRKGVARTPVVGAARVAKFLRAISTWFWDDVDVRWAITNGQTSAVLLRDGAVYGLLTVSATTEGIDKVLWLVNPEKNKAVSVAG*