ggKbase home page

H1-18-all-fractions_k255_3513717_7

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 5451..6047

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6HD54_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 192.0
  • Bit_score: 189
  • Evalue 2.20e-45
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFC82161.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 183
  • Evalue 2.90e-43
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 181
  • Evalue 2.30e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCGTCCAGACGGTCCGCCTGCCGGTACCGGCGAACGAACGCTCCGTGCCGACGCCCGGCGCAACCGGGCGCGGATCCTGGAGGTGGCCGCGGCGGTGTTCGCCGAGCAGGGCGCATCGGCCTCGACCGAGGCGGTGGCCGAGCGCGCCGGCGTGGCGATCGGCACGGTGTTCCGGCACTTCCCGACCAAGCCGGATCTGCTGCGGGCCGTGGTGATGGACGTGCTGGACCGGCTCATCGACGACGTCGACGCGCTCCTCAACGACGACCCGCGGGACGCGACCGCCCTGTTCGAGTTCTGCACCCGTGTCATGTCGGCCAGCACGCGGAACAGGGCCGTGTTCGAGCGGCTCGCGGAGACCGGCACCCGGGTCAACGTCGGCGACGCCCTGACCCGTCTGCGGCCCGCCGTCGACCTGCTGCTCGAACGCGCTCAGCAGGCCGGCGCCGTCCGCGACGACCTGCGAGCCGACGATCTGAGCGCCCTGCTCGCGGCCATCTGCCAAGGGGCGATGACGGATGGGTGGAGCGAGCAGCTCCGCCATCGCGCGCTGACGATCCTCTTCGAGGGCATCCGACCGGTCGCACGGGGTTGA
PROTEIN sequence
Length: 199
MRPDGPPAGTGERTLRADARRNRARILEVAAAVFAEQGASASTEAVAERAGVAIGTVFRHFPTKPDLLRAVVMDVLDRLIDDVDALLNDDPRDATALFEFCTRVMSASTRNRAVFERLAETGTRVNVGDALTRLRPAVDLLLERAQQAGAVRDDLRADDLSALLAAICQGAMTDGWSEQLRHRALTILFEGIRPVARG*