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H1-18-all-fractions_k255_5583245_2

Organism: H1-18-all-fractions_metab_conc_5

near complete RP 44 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(902..1918)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 338.0
  • Bit_score: 582
  • Evalue 2.80e-163
DNA-directed RNA polymerase subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKN0_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 337.0
  • Bit_score: 573
  • Evalue 9.40e-161
rpoA; DNA-directed RNA polymerase alpha chain similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 337.0
  • Bit_score: 573
  • Evalue 2.70e-161

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGCTTCAGAGAAATTGGCAAACCCTGATCAAACCGAAGCAGCTCTCAGTCGAGCCAGGCGATGATCCCAAGCGGACCGCCACGGTTGTCGCCGAACCGCTCGAGCGCGGCTTCGGCTTGACGCTCGGCAACGCGTTGCGGCGCGTGTTGCTGTCCTCGCTGCAAGGTGCGGCCGTCACATCGATGCAGATCGAGGGCGTGTTGCACGAATTCTCTTCGCTGCCGGGTGTGCTCGAAGACGTGACCGACATCGTTCTCAACGTAAAGAGCATTGATCTGCGGATGTATGGCGAGGGGCCGAAGCGCATGCGGCTGCGCGCCAATGGTCCCGGCGAGGTTCGCGCCGGCGCGATCGAAACCGGCCACGACATCGACATCATGAACCCCGACCTGGTGATCTGCACGCTCGACAGCGGCGTCCGCATTGCGATGGAGTTGACCGTCGAGAACGGCAAGGGCTATGTCCCGGCGACGCAAAACCGCCCCGAGGACGCGCCGATCGGCCTCATTCCGGTGGATGCGCTGTTCAGCCCCGTGCGCAAGGTGTCGTACCGGGTCGAAAACACCCGCGTCGGTCAGGTAACCGATTACGACCGGCTGGCGCTGCGGGTCGAGACCAACGGCGCCGTCACCCCCGAAGATGCGGTGGCGCTCGCAGCGCGGATCCTGCAGGACCAGCTGCAGCTGTTCATCAATTTCGAAGAGCCGCGGCACCCGTCCGAAGAGGCGCGCCCGAGCGAGCTGCCGTTCAACAAGAATTTGTTGCGCAAGGTCGATGAGCTTGAGCTGTCGGTTCGCTCGGCCAATTGCCTGAAGAACGACAACATCGTTTATATCGGCGACCTCGTTCAGAAATCCGAGGCGGAAATGCTGCGTACGCCAAATTTCGGTCGCAAATCCTTAAACGAGATCAAAGAGGTGCTGGCGCAAATGGGGCTGCATCTCGGCATGGAGATCCCGAATTGGCCGCCCGAAAACATCGAGGAATTGGCCAAGCGCCTCGACGAGCCCTATTGA
PROTEIN sequence
Length: 339
VLQRNWQTLIKPKQLSVEPGDDPKRTATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVTSMQIEGVLHEFSSLPGVLEDVTDIVLNVKSIDLRMYGEGPKRMRLRANGPGEVRAGAIETGHDIDIMNPDLVICTLDSGVRIAMELTVENGKGYVPATQNRPEDAPIGLIPVDALFSPVRKVSYRVENTRVGQVTDYDRLALRVETNGAVTPEDAVALAARILQDQLQLFINFEEPRHPSEEARPSELPFNKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEIPNWPPENIEELAKRLDEPY*