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H1-18-all-fractions_k255_2830416_25

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(24475..25062)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM60 RepID=J3GYS4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 230
  • Evalue 1.10e-57
Transcriptional regulator {ECO:0000313|EMBL:EJM79182.1}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 230
  • Evalue 1.60e-57
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 190.0
  • Bit_score: 179
  • Evalue 4.90e-43

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Taxonomy

Pseudomonas sp. GM60 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAAAATCACCAAGGAAAAAGCGGAAGAAAACCGCGTCGCGCTGGTCGCGGCGGCAGCCCGGCTGTTCCGGGAAAAAGGTGTGGACGGCGTGGGGGTGGCGGAAATCAGCAAGGTGGCGGGGCTGACTCACGGCGCCCTGTATGCGCACTTTCCGTCGAAGGAAGCGCTGGCCGTTGAGGCGATGAAGCTCGGCAAGGACCAGGCGAAATCGAAGCTGATGGAGGGCAATCGAGACGGCGAACCCGATCTCGAGGCGTTTGTGGCCTACTACCTGGCCCCGGAACAACGCGACAATTACGCCGAGTCCTGCGCGCTGGCGGCCGCGGCCAGCGAAATCGGCCGCCACGAAGCTGCTTTGAGCGCCGTGTCCACCGAGTCCTTTTTAAATACCATCAACGCTTTTGAAAAGCGCCTTGTCGCGAACCAGCCGCAGTTGAATGCGCGCCCGCAGGCGATGGCCCTGATGGCAAGCCTGATCGGGGCGATGGCAATGGCGCGCGCCACCGTCAAGAGTCACCCCGAAGTATCAGCGCAGATACTGGAAGGCGCGCATCAACTGGTGAACGACGCCCTCAACAAGCGCTGA
PROTEIN sequence
Length: 196
MKITKEKAEENRVALVAAAARLFREKGVDGVGVAEISKVAGLTHGALYAHFPSKEALAVEAMKLGKDQAKSKLMEGNRDGEPDLEAFVAYYLAPEQRDNYAESCALAAAASEIGRHEAALSAVSTESFLNTINAFEKRLVANQPQLNARPQAMALMASLIGAMAMARATVKSHPEVSAQILEGAHQLVNDALNKR*