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H1-18-all-fractions_k255_3688288_4

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 4516..5442

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 302.0
  • Bit_score: 498
  • Evalue 4.90e-138
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 302.0
  • Bit_score: 464
  • Evalue 1.20e-128
tRNA pseudouridine synthase B n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036A3039 similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 307.0
  • Bit_score: 510
  • Evalue 8.90e-142

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGAAGCCAACACACACCAAAAAACCGCGCGACCTCGTCGACGGCGTCCTCCTTCTCGACAAACCCGTCGGCCTGTCCTCCAACGACGCCCTCATCAAGGCCAAGCGCATCCTCAACGCGAAAAAGGCAGGCCACACCGGCACCCTCGACCCCTTCGCGACGGGCCTGCTGCCGCTGTGCTTCGGCGAAGCCACCAAGTTCTCGCAAGACCTGCTGGAAGCCGACAAGACCTACGACACCACAGTCCACCTCGGCATCACCACCAACACGGGCGACACCGAGGGCGAAGCGATCGCCACGAAGGAAGTGAACGTCACGCCGGAACAGATCGAGGAAGTCCTCAAACAATTCCGCGGTCCGATCCTGCAAGTACCCCCCATGTACTCGGCGCTCAAACGCGACGGCAAAGCCTATTACGAATACGCCCGGGAGGGCATCACCCTCGAGCGCGAAGCGCGCCCCGTCACCATCCACAAGCTCGAACTGCTTGATTACACGGCGCCATTTTTAAAGCTGTCCGTGACCTGCTCGAAAGGCACCTACATCCGCGTCCTCGGCGAGGACATCGGCCACGCCCTCGGCTGCGGCGCCCATTTGAATGCGCTGCGCCGCACCCAGGTCGGCCCGCTGACGGTGGACGGCATGGTGACCCTGGAAGACATGCAGGCCAACCCCGCGCCCCTGTCCATGCTGGCCCCGGTCGACGCGCTGCTGTCCTCGTTTCCCGCCGTGATGCTGACGGAAGAACTGGCCAAACGTTTTCTGAACGGCCAGCGCCTCGCGCTGGGCAAGGAGGACGTTGCGGTGCCAGCGGAGCAGGGCAGGGTGCGTGTTTATCTCGGCGAAAAACTGCTGGGGACGGCAGCTTTGCAGGAATACGCGATCCTGGCGCCCGAACGCTTGATCGCCTTCACCGCAGCGATGTAA
PROTEIN sequence
Length: 309
MKPTHTKKPRDLVDGVLLLDKPVGLSSNDALIKAKRILNAKKAGHTGTLDPFATGLLPLCFGEATKFSQDLLEADKTYDTTVHLGITTNTGDTEGEAIATKEVNVTPEQIEEVLKQFRGPILQVPPMYSALKRDGKAYYEYAREGITLEREARPVTIHKLELLDYTAPFLKLSVTCSKGTYIRVLGEDIGHALGCGAHLNALRRTQVGPLTVDGMVTLEDMQANPAPLSMLAPVDALLSSFPAVMLTEELAKRFLNGQRLALGKEDVAVPAEQGRVRVYLGEKLLGTAALQEYAILAPERLIAFTAAM*