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H1-18-all-fractions_k255_2522382_6

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5134..5682

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WS27_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 161.0
  • Bit_score: 220
  • Evalue 1.10e-54
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM13364.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 250
  • Evalue 1.80e-63
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 182.0
  • Bit_score: 241
  • Evalue 1.70e-61

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Taxonomy

Kutzneria sp. 744 → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTGCCCCGTGATCCGGCGTCAGAGCACCAGAGTGGAGGACGTCGTCCCTGCCAATGACGAGGCGCTGATCAGGATGCTCTACCGTGAGTTCGGCGGCGCCCTGTTCGGACATGTGCTGTACCTGACGGGAAACGACCGTCAGTGGGCCGAGGACGTGGTCCAGGAGACCCTGCTCCGTGCCTGGCGCAACGCCGACCGGTTGGACCGCGAGCCGGGCATGCTGCGTGCCTGGCTGTTCACCGTGGCCAGGCGCATCGTGATCGACGGCCGCCGCAGCCTCGGCGCTCGGCCGCGCGAGGTGGACGTCACCCCGCTGAACCTGATGCCGGTGCCGGACCGCTCCGAGCAGTCCCTGTCCGCGATGGTCGTCGCGGACGCCTTACAGAGCCTGCGCACCGAACATCGCGAAGCGATCGAGGAAACCTACCTGCGCGGGCGCACCATCAACGAGGCCGCGCAACTGCTCGGCGTCCCGCCGGGTACCGTCAAGTCTCGGGTGTACTACGCGTTGCGCGCGCTGCGCCGCGAGCTCCAGGACGGGGAGTGA
PROTEIN sequence
Length: 183
MCPVIRRQSTRVEDVVPANDEALIRMLYREFGGALFGHVLYLTGNDRQWAEDVVQETLLRAWRNADRLDREPGMLRAWLFTVARRIVIDGRRSLGARPREVDVTPLNLMPVPDRSEQSLSAMVVADALQSLRTEHREAIEETYLRGRTINEAAQLLGVPPGTVKSRVYYALRALRRELQDGE*