ggKbase home page

H2-16-all-fractions_k255_7573861_6

Organism: H2-16-all-fractions_metab_57

partial RP 27 / 55 MC: 3 BSCG 25 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(4027..5271)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E010 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 402.0
  • Bit_score: 669
  • Evalue 2.00e-189
rpsA; ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 404.0
  • Bit_score: 664
  • Evalue 1.10e-188
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 404.0
  • Bit_score: 664
  • Evalue 5.30e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium indicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTCTCGCGACGCGCGATTCTCGAGGAAACGCGCGCCGAGCAGCGCTCGGGCCTGATCCAGAGCCTCGCCGAAGGCCAGGTGATCGAGGGCGTCGTCAAGAACATCACCGACTACGGAGCATTCGTCGATCTCGGCGGCATCGACGGCCTGCTCCACGTCACCGACATCAGCTACAAGCGCGTCAACCACCCATCCGAAGTGCTCGGCATTGGCGACACGGTTCGCGTGCAGATCATCCGCATCAACCGCGACACCCAGCGAATCAGCCTCGGCATGAAGCAGCTCGAGAGTGATCCGTGGGAGGGCGCGTCGGTGAAATATCCGGTCGGCGGCGTGTTCCGCGGCCGGGTCACGAACATCACCGAATATGGCGCCTTCGTCGAGCTCGAGCCCGGCATCGAGGGCCTGGTTCACGTGTCGGAGATGAGCTGGACCAAGAAGAACGTCCATCCTGGCAAGATCGTCAGCACGTCGCAGGAAGTGGACGTCATGGTGCTGGAGGTCGACGAGGAGAAGCGTCGGATTTCGCTTGGCCTCAAGCAGGCGCAGGAGAATCCGTGGGCGGCGTTCGCCGAGAAGCACCCGGTCGGCTCCGTCGTCGAGGGCGAGGTCAAGAACGCGACCGAGTTCGGGCTGTTCGTCGGACTTGAAGGCGACGTCGATGGCATGGTCCACATGTCCGATGTCGCCTGGGGCGTCTCGGGCGAGCAGGCGCTTCAGCTTCACCGCAAGGGGGAGACGGTGAAGGCGCAGGTGCTCGACGTCGACGTTGAGAAGGAACGCATTTCCCTCGGCATGAAGCAGCTCGAGAGCGGCGGCGCGGGCGCCGGCGCTTCGACTGGCGCCGGGGCGCGCGGCAGCGCGTCCGGTGCCGGCGGCGGCGCCAAGAAGGGCGAGACGGTCACAGTTTTGGTTCGCGCGGTCCAGGATGCCGGCCTCGACGTCCAGGTTGGCGACGACGGTGTGACCGGTTTCATCAAGCGCGGCGATCTCGGTCGCGATCGCGACGAGCAGCGTCCGGAGCGGTTCCAGGTTGGCCAGAAGCTCGATGCGATGGTCATCGGCTTCGACCGCTCGAAGAAGCCGAACTTCTCGGTCAAGGCGCTGCAGATCGCCGAAGAGAAGCAGGCCGTCGCGCAATACGGCTCATCGGATTCGGGTGCATCGCTCGGCGACATCCTCGGCGCTGCGCTCAAGGAAGCCCAAGCTGGGGCCAAGCCCGCCAAGCCGACCAAAAAGAAGTAG
PROTEIN sequence
Length: 415
VSRRAILEETRAEQRSGLIQSLAEGQVIEGVVKNITDYGAFVDLGGIDGLLHVTDISYKRVNHPSEVLGIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGASVKYPVGGVFRGRVTNITEYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEVDEEKRRISLGLKQAQENPWAAFAEKHPVGSVVEGEVKNATEFGLFVGLEGDVDGMVHMSDVAWGVSGEQALQLHRKGETVKAQVLDVDVEKERISLGMKQLESGGAGAGASTGAGARGSASGAGGGAKKGETVTVLVRAVQDAGLDVQVGDDGVTGFIKRGDLGRDRDEQRPERFQVGQKLDAMVIGFDRSKKPNFSVKALQIAEEKQAVAQYGSSDSGASLGDILGAALKEAQAGAKPAKPTKKK*