ggKbase home page

H2-16-all-fractions_k255_900310_14

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: 13223..14152

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036E67AD similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 306.0
  • Bit_score: 416
  • Evalue 1.30e-113
Transcriptional regulator {ECO:0000313|EMBL:EJL78112.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 312.0
  • Bit_score: 408
  • Evalue 5.10e-111
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 308.0
  • Bit_score: 369
  • Evalue 5.30e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGATCGCGCCTTGCTGCTTCACCTGCCCGTCGTGCTGGCCGTGCATCGCCGCGGCGGCTTCGCGGCCGCGGCCAATGAACTGGACATGAGTCCGTCGGCAGTGAGCCACGCTGTGCAGCTGGTCGAGGCCGGCCTGGGCCAGCCGCTGTTCGCTCGCACCACGCGCAGCGTGCGGCTGACCGAGGCTGGCGCCGCCTTCGTCGCCAGCGTCGGGCCGGCGCTGGCGGAGATCGAGGAAGCGGCCGACCGCATCGGCGCCGACCAGGGTCGCGTCACCGGCACGCTGAAGCTGAACGCGCCGCGCACCGCGCTGCCCATCGCCGTGACGCCGCTGTTGGTGGAGATGGCCCGGCGCCATCCGGAGCTCATCGTCGAGGTCACGTCGGACGACGGGCTGGCCGACATCGTCGCGCAGGGCTTCGACGCCGGCATCCGCCTGGGCCACACGGTGGCGCAGGACATGGTGGCAACGCGGCTGACGCCGCCCTTTCGCTCCGTCATGGTCGCCTCGCCGGCTTATCTCGCGGCTCGGGGCACGCCGGCCAGGCTGCGCGACCTGGATGGCCACAACTGCATCGGCTACCGCTTCGTGACGTCCGGCGCGATCTACGACTGGGACTTGCGCGACGGCACGCGGCACGTCGCCAAGTCGGTCAGCGGCAGCGTGCGCGTGACCGACGCGGTGCACGCGAAGGAACTGGCGCTGGCCGGCGTCGGCATCGCCTACCTGTTCGAGCCGCTGGCTCACGCCGAGCTGCGCGAGGGCACGTTGCGCCAGGTGCTGCCGCGCAACGCGTTCGAAGAGCCCGGCCTGTTCCTCTACTTCCCGCGGCGGGCGTCGCAGGCGCCGAAGCTGCGAGCCTTCATCGAGGTCGCCCGCGAGCTGCTCAACGGACGACCGGCACCTGCATCGCCACCTTCGCCTTGA
PROTEIN sequence
Length: 310
MDRALLLHLPVVLAVHRRGGFAAAANELDMSPSAVSHAVQLVEAGLGQPLFARTTRSVRLTEAGAAFVASVGPALAEIEEAADRIGADQGRVTGTLKLNAPRTALPIAVTPLLVEMARRHPELIVEVTSDDGLADIVAQGFDAGIRLGHTVAQDMVATRLTPPFRSVMVASPAYLAARGTPARLRDLDGHNCIGYRFVTSGAIYDWDLRDGTRHVAKSVSGSVRVTDAVHAKELALAGVGIAYLFEPLAHAELREGTLRQVLPRNAFEEPGLFLYFPRRASQAPKLRAFIEVARELLNGRPAPASPPSP*