ggKbase home page

H2-16-all-fractions_k255_4336007_9

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: comp(5924..6502)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Ralstonia RepID=E2SU52_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 177.0
  • Bit_score: 173
  • Evalue 1.60e-40
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 174.0
  • Bit_score: 177
  • Evalue 1.20e-41
rpoE; rna polymerase sigma factor protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 174.0
  • Bit_score: 172
  • Evalue 5.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAACGGTCACCTCGTCGTCCAGGCGCGATTTTCGACGATGCAAGACGATGGCCACGCGCGCTTTGCCGCGTCCGTGTTGCCGCACCTGGATGCGGCCTACAACCTCGCGCGCTGGCTGGTGCGCGACGGGCACGATGCGCAGGACGTCGTGCAGGACGCGCTCGTGCGTGCGCTGCGCCATTTCGACGGCTTTCGCGGTGGCGACCCGCGGCCGTGGCTGCTGGCCATCGTGCGCAATGTCGCGTTCGCCTGGCTGGGCGCGCGGCGGCCGAACGAGATCGAAGTGCCTGACGACGAACTCGACGCCGCGCTGGCTACCGGTGCGCCGCCCGGCGATCCCGAATCGCTGGCGATCCGCCACGCGCAGCGGCGCGAGATCGACGCCGCGATCGCCGCGTTGCCGATCGCTTTGCGCGAAGCGCTGGTGCTGCGCGAGCTCGAGGAGCTGTCGTATCGCCAGATCGCGCGCATCACCGACGTGCCGATCGGCACGGTGATGTCGCGCCTGTCGCGCGCACGCCATCTGCTCGCAGCAGCGCTCGCACCGCAGCCGCCACGCGAAGGGAGTGCCCCATGA
PROTEIN sequence
Length: 193
MNGHLVVQARFSTMQDDGHARFAASVLPHLDAAYNLARWLVRDGHDAQDVVQDALVRALRHFDGFRGGDPRPWLLAIVRNVAFAWLGARRPNEIEVPDDELDAALATGAPPGDPESLAIRHAQRREIDAAIAALPIALREALVLRELEELSYRQIARITDVPIGTVMSRLSRARHLLAAALAPQPPREGSAP*