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H2-18-all-fractions_k255_1580515_6

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(3123..3713)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NSX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 193.0
  • Bit_score: 121
  • Evalue 5.70e-25
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 120
  • Evalue 2.70e-25
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 182.0
  • Bit_score: 305
  • Evalue 3.00e-80

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
TTGTCGCTTCAGCAACCTGATTTTGGCGTCCTGCGCAAGGCGCAGAGAGGCGACGAGCGGGCGTTCAACATCATCGTCCGCGCATATCAGGTTCCCATCTACAACTACGTTCTGCGGCTCGTGGGCGACCGGGCGCTTGCGGAAGACCTGACGCAAGAGGTCTTCCTCCGCGTCTACCAGGGCCTGCCGAAGTTCTCGCTGCGGTCGAAGTTCACGACGTGGTTGTTCCAGGTGACGAAGAACCGCGTTCTCGACGAGCTTCGTGCGACCGAGCGTCGTCCGCGCGCCGTCGTCGCGCTCGACGACGTGCCTCCGCTGGAAGTCGTCGACGCGCCGTTCGAGCGGCTCGAGGCAATCGACGCAGTCTGGCGTGCGGTCGAGGGGTTGAACGTCGACCTCAAGATGGCGCTGCTCCTGCGCGACGTCGTCGGCCTCTCCTACACCGAGATCGCCGACTCGCTCGAGATCACGCTCGCCACCGTCAAGTGGCGAATCTACAAAGCACGCGAGGACGTCCAGCTCGCGCTCGCGCGCGAGGGGATCACGTTCGGCGACGAGGTCGCCGAGCGCGAGACCGTCTCGACCACCTAG
PROTEIN sequence
Length: 197
LSLQQPDFGVLRKAQRGDERAFNIIVRAYQVPIYNYVLRLVGDRALAEDLTQEVFLRVYQGLPKFSLRSKFTTWLFQVTKNRVLDELRATERRPRAVVALDDVPPLEVVDAPFERLEAIDAVWRAVEGLNVDLKMALLLRDVVGLSYTEIADSLEITLATVKWRIYKAREDVQLALAREGITFGDEVAERETVSTT*