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H2-18-all-fractions_k255_5631603_3

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(1939..2574)

Top 3 Functional Annotations

Value Algorithm Source
RhtB family transporter n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7D3A0_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 214
  • Evalue 9.00e-53
RhtB family transporter similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 214
  • Evalue 2.60e-53
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:KJX89994.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 214
  • Evalue 1.30e-52

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGCCGTCTCCCTCGACGTATGCGCTGTTCATCGCGACGGCCCTGGCGCTGCTCGCGATTCCAGGCCCGGCCGTCCTCTACGTCGTCGGCCGGAGCATCGACCAGGGCCGCACGGCAGGCCTCGCCTCGGTGCTCGGGATCACGACGGGAACGATCGTGCACATCACGGCGGCGACGGTCGGCCTCTCGTCGCTGATCCTCGCGTCGAAGGTGGCGTTCGACGCCGTTCGCTACGTCGGGGCGGCGTACCTCGTGCTGCTCGGCATCCGGCGTCTGCTGACGCGGGGACAGGAAGACGCCGGCGCCGTCCGTCCGCCGAGGACACTCCGCCGCCTGTACAGCCAGGGGCTCGTCGTGAACCTGCTCAACCCGAAGACGATCGTCTTCATCTTCGCCTTCATCCCGCAGTTCGTCGACGTCGGCGCGGGGCACGTCTGGCTCCAGATCCTCCTGCTCGGGCTGACGTTCGCCGGCCTCGGCCTGATGAGCGACAGCCTCTACGCGATCGTCGCCGGCACGGTTGCCGACCGCCTCCGTGGAACGCCGCTCGTCGCCCGGGTCGAGCGCTGGTTCGGCGGCACCGTGCTGATCGGGCTCGGGGTCGCCTCTGCGCTCGTGGCCCCAAACCGGAAATAG
PROTEIN sequence
Length: 212
VPSPSTYALFIATALALLAIPGPAVLYVVGRSIDQGRTAGLASVLGITTGTIVHITAATVGLSSLILASKVAFDAVRYVGAAYLVLLGIRRLLTRGQEDAGAVRPPRTLRRLYSQGLVVNLLNPKTIVFIFAFIPQFVDVGAGHVWLQILLLGLTFAGLGLMSDSLYAIVAGTVADRLRGTPLVARVERWFGGTVLIGLGVASALVAPNRK*