ggKbase home page

H2-18-all-fractions_k255_2219397_2

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: comp(771..1352)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 191.0
  • Bit_score: 144
  • Evalue 8.60e-32
2'-5' RNA ligase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V9N5_THELD similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 193.0
  • Bit_score: 131
  • Evalue 7.00e-28
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 193.0
  • Bit_score: 131
  • Evalue 2.00e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAATGAACCTAAGAAAATGTTGCGCACCTTTATCGCCATCGACCTCACCGAGGAGGTGCGTCAACGTATAACGAAACACATAGAGACGTTGAAAGCTGCGTCGCCGGACACTCAAGCGACATGGGAAAAACCCGGAAAAGCCCACATCACCCTCAAGTTTCTCGGCAACGTCGAACAGCAGCGAGTTGAATCTATTGTCTCTGCATTAGCTCGCGCTGCGTCAAGTATTGGCAATTTCTCCGTTGAAATTGGTGAAGCCGGAGCGTTTTACAGCCGCGGTAAGCCGCATGTGCTTTGGCTCGGCGTGGCGGATCAAACCGAGGGACTTGCCCGACTCTACTCCGCAGTGGAACGAGAATTAGAGGGACTCGGATTTCCGAAAGAGAAGCGGCCGTTTCATCCACACATTACAATTGCACGCTTAAAGAAGCCCGAGGGCGCGAAACAACTCGCGAGCGAACATAAGGCGTTAGGGTTTGAACCTGCCAAATTAAATGTATCGGAAGTGCTTTTGATCGAAAGCGAATTGGGTCCCGGTGGATCGACCTACCGAACACTATCAACTCAAACATTGGGATAG
PROTEIN sequence
Length: 194
MNEPKKMLRTFIAIDLTEEVRQRITKHIETLKAASPDTQATWEKPGKAHITLKFLGNVEQQRVESIVSALARAASSIGNFSVEIGEAGAFYSRGKPHVLWLGVADQTEGLARLYSAVERELEGLGFPKEKRPFHPHITIARLKKPEGAKQLASEHKALGFEPAKLNVSEVLLIESELGPGGSTYRTLSTQTLG*