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H2-18-all-fractions_k255_3571351_4

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: 3843..5150

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQD3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 417.0
  • Bit_score: 556
  • Evalue 2.00e-155
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57957.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 417.0
  • Bit_score: 556
  • Evalue 2.80e-155
sigma factor, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 420.0
  • Bit_score: 451
  • Evalue 1.50e-124

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1308
ATGCGCGTATGGCACAGCGATACTTCTGTGATGGAAGAACCAATCCGCGTTTCCAAACTCGTCGAGCATCTTTTCCGTGATGAATCGGGAAAGATGGTCGCGACGCTGACCCGGATTTTTGGGATCGAGCATTTGAATCTTGCGGAGGATGTGGTGCAGGAGGCACTCTCGCGCGCGTTGCAGACCTGGCCGTATCGCGGGGTCCCGCAAAATCCCTCAGCGTGGATTATGAGGGCGTCGCGCAACCTGGCGCTTGATGTGATCCGCCGGCAAAAGATTTTCCACGCGAAAGAAGCCGAAATTGCGCGATTGATCGAGCGGGACGGATCAACACCGGGAGCTGCAATTTTCTCGGAGCATGAAATCGCGGACGACCGGTTGAGGATGATGTTCGTCTGCTGTCATCCAGTCATTCCATCGGAAGCGCAGGTGGCGCTAGCGTTGAAAACACTCTGCGGCTTTAGCGTAACGGAAATCAGTCGCGCATTTCTCACGACGGAAGCGGCGATTGCTAAGCGCCTGACGCGAGCGAAACAAAAAATCCAGGAGGCGCGGGTGCCATATGAGATTCCTGCCGGTGAGGAGTTGGCGCGCCGTCTCGACAGCGTCCTGCAATCGCTCTACCTGCTGTTCAACGAAGGTTATAAAGCGTCGAGCGGCGACAACCTCGTGCGTGAAGAACTGTGCAGAGAGGCGATCCGTCTCACGGAATTGCTGGCACAACATCTGGCGGGCAACCAGCCGAAGACGCATGCGTTACTTGCTTTGATGTTGTTGAACGCGGCGCGGCTTGCCGCGCGCGAAGACCGCGAAGGCAATCTGCTTCGGCTTCAAGAACAGGATCGGACGCGCTGGAACCAGGCGATGATCGCTCGTGGGATTTCGCACCTACGCGAATCGGCTGCAGGCGATGCGGCAAGCGAATATCATCTTCAGGCAGGGATTGCAGCTTGTCACGCAATGGCGATTCATTACGAATCGACCGATTGGGACCGGATTTTGTCGCTCTACGATCGATTGACGGAATTCGATGATTCGCCTGTGATCGCCCTTAATCGCGCGGTCGCAGTAGCGAGTGTTCGCGGTCCGAAGGTAGGATTGGACGCAGTGCGCAGTATCCGCGGTCGAGAAAAGTTAAGTTCGTATTACTTGTTGTACGCGGTGATCGGCGATCTCGAGATGCGATTAAACAATCGTCAAGCCGCTGCGCAGGAATTCCGCAAGGCATTCGAACTCGCTGAAACCAAATCGGAGCGAGCCTTCCTTTTGAAACGACTGCAGCGCTGCGTCGACGGCGAGACCGCTTAG
PROTEIN sequence
Length: 436
MRVWHSDTSVMEEPIRVSKLVEHLFRDESGKMVATLTRIFGIEHLNLAEDVVQEALSRALQTWPYRGVPQNPSAWIMRASRNLALDVIRRQKIFHAKEAEIARLIERDGSTPGAAIFSEHEIADDRLRMMFVCCHPVIPSEAQVALALKTLCGFSVTEISRAFLTTEAAIAKRLTRAKQKIQEARVPYEIPAGEELARRLDSVLQSLYLLFNEGYKASSGDNLVREELCREAIRLTELLAQHLAGNQPKTHALLALMLLNAARLAAREDREGNLLRLQEQDRTRWNQAMIARGISHLRESAAGDAASEYHLQAGIAACHAMAIHYESTDWDRILSLYDRLTEFDDSPVIALNRAVAVASVRGPKVGLDAVRSIRGREKLSSYYLLYAVIGDLEMRLNNRQAAAQEFRKAFELAETKSERAFLLKRLQRCVDGETA*